Query= MSMg01no193_c13.b1 MSMg01no193_c13.b1 CHROMAT_FILE:
MSMg01no193_c13.b1 PHD_FILE: MSMg01no193_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:26 2005
(354 letters)
>mm_chr6_87337660_87338413
Length = 754
Score = 638 bits (330), Expect = 0.0
Identities = 345/350 (98%)
Strand = Plus / Plus
Query: 5 gaattctcttaccttgcctaagaagaaagctactcactgttatttgcatactattttggg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcttaccttgcctaagaagaaagctactcactgttatttgcatactattttggg 264
Query: 65 ggaaattatgttagaatgcacctaggccttaaaatatttaagttgttcagttcctctatg 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaaattatgttagaatgtacctaggccttaaaatatttaagttgttcagttcctctatg 324
Query: 125 tggtgtgctctgcccatcaagggagttttctgcagcagacattaataaaagaagaggggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 tggtgtgctctgcccatcaagggagttttctgcagcagacattaataaaagaataggggg 384
Query: 185 ctgggttaagctagccatagtttcttgtgtacttgaggctcgcccagctcaagtgcaccc 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 ctgggttaagctagccatagtttcttgtgtacttgaggctggcccagctcaagtgcaccc 444
Query: 245 atcatgacaagtgggactggcagggtcctcccttctcttatcatccatgaaaagtcagca 304
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 445 atcatgacaagtgggactggcagggtcctcccttctcttaacatccatgaaaagtcggca 504
Query: 305 tctggcttcagtaacaaacggggcccctgaaagtcaaaggaagcggctat 354
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctggcttcagtaacaaacggggcccctgaaagtcaaaggaagcggctat 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_c13.g1 MSMg01no193_c13.g1 CHROMAT_FILE:
MSMg01no193_c13.g1 PHD_FILE: MSMg01no193_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:26 2005
(328 letters)
>mm_chr6_87478687_87479413
Length = 727
Score = 578 bits (299), Expect = e-169
Identities = 320/329 (97%), Gaps = 5/329 (1%)
Strand = Plus / Minus
Query: 1 ggcaaaactattaagaaaaacaaagaatcaaatcatataaaattcagggttagtgccctt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ggcaaaactataaagaaaaacaaagaatcaaatcatataaaattcagggttagtgccctt 467
Query: 61 tgagaagggaaaggatggaaaaagcatttgggaaggtcccatgtcaccaatccacacacg 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgggaagggaaaggatggaaaaagcatttgggaaggtcccatgtcaccaatccacacacc 407
Query: 121 tggttatgtatcaaatgaacaacaagacgaattcagacgcacacaaaccatcagagccat 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 406 tggttatgtatcaaatgaacaacaagacgaattcagacgcacacagaccatcagagccat 347
Query: 181 gcaagctctgttaacagtggttaactgtaggaaaagactttgtcaacgggatgtgctcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gcaagctctgttaacagtggttaactgtaggaaaagactttgtcaacgggatgtgctcac 287
Query: 241 acgtgatgcatgattcttctaaacgttctgtacta--tttaaccagtgttactgtattgt 298
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 286 acgtgatgcatgattcttctaaacgttctgtactaag---aaccagtgttactgtattgt 230
Query: 299 taaaaattacccaaagctagcactcatct 327
|||||||||||||||||||||||||||||
Sbjct: 229 taaaaattacccaaagctagcactcatct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 727
Length adjustment: 9
Effective length of query: 319
Effective length of database: 718
Effective search space: 229042
Effective search space used: 229042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
