Query= MSMg01no202_c07.b1 MSMg01no202_c07.b1 CHROMAT_FILE:
MSMg01no202_c07.b1 PHD_FILE: MSMg01no202_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:50 2005
(346 letters)
>mm_chr6_126503595_126504336
Length = 742
Score = 611 bits (316), Expect = e-179
Identities = 334/342 (97%), Gaps = 4/342 (1%)
Strand = Plus / Minus
Query: 1 cctgtggagcaggcaccacggggctctggtgtgtctgttgctccatgatttatttttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cctgtggagcaggcaccacggggctctggtgtgtctgttgctccatgatttatttttgtc 479
Query: 61 tccctcccagatttcacggacagggctgtgcagagtggctggtaccatctggtaccacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tccctcccagatttcacggacagggctgtgcagagtggctggtaccatctggtaccacgt 419
Query: 121 gggggcactgatacctcacaggatcggaaatgtgctggagagcgcttgcttttcatttta 180
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 418 gggggcactgatacctcacaggatcggaaatgtgctggagagc----gcttttcatttta 363
Query: 181 ctgtgagagccagcctctcctcctgcggccatcccaatcctccgtgaaccctccctcgtc 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 362 ctgtgagagccagccactcctcctgcggccatcccaatcctccgtgaaccctccatcgcc 303
Query: 241 cgtgccaggttcttcttcagaatcctcagcagccctcttggtttccatgaccccggaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 302 cgtgccaggttcttcttcagaatcctcagcagccctcttggtttccatgaccctggaggt 243
Query: 301 aggtgttttatccgtgtgatttggtgctcaaaacagtgttca 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggtgttttatccgtgtgatttggtgctcaaaacagtgttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 742
Length adjustment: 9
Effective length of query: 337
Effective length of database: 733
Effective search space: 247021
Effective search space used: 247021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no202_c07.g1 MSMg01no202_c07.g1 CHROMAT_FILE:
MSMg01no202_c07.g1 PHD_FILE: MSMg01no202_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:51 2005
(286 letters)
>mm_chr6_126394808_126395493
Length = 686
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%)
Strand = Plus / Plus
Query: 1 actgggagactccatgcatctctactatgtttttattcttattgctcctgctttatggtt 60
||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct: 201 actgggagactccatgcgtctctactatgtttttattcttattgttgatgctttatggtt 260
Query: 61 ttaaagcaaatgtcctattttattcgttgtatccaatagtgggaattttcctgtaaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaagcaaatgtcctattttattcgttgtatccaatagtgggaattttcctgtaaagca 320
Query: 121 taaatctattgtcaaaccttcagtgttttatgtcatccaaagtatgcatcatattaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaatctattgtcaaaccttcagtgttttatgtcatccaaagtatgcatcatattaaatc 380
Query: 181 tataaagtgtcttagaaatctataaagtatccctcttttctgagatggtctttgttggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataaagtgtcttagaaatctataaagtatccctcttttctgagatggtctttgttggcc 440
Query: 241 aggtgaggctcaaatactgaacttaagtggatcgatcctcttgctt 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtgaggctcaaatactgaacttaagtggatcgatcctcttgctt 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
