Query= MSMg01no215_a01.b1 MSMg01no215_a01.b1 CHROMAT_FILE:
MSMg01no215_a01.b1 PHD_FILE: MSMg01no215_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:31 2005
(651 letters)
>mm_chr6_12023655_12024705
Length = 1051
Score = 1199 bits (620), Expect = 0.0
Identities = 641/648 (98%)
Strand = Plus / Plus
Query: 4 ggaattcagttcccctccaactcgctttcagtctgaggtagtttttgcagtgagtaaatt 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagttcccctaaaactcgctttcagtctgaggtagtttttgcagtgagtaaatt 263
Query: 64 aaaactttattacccacactgtatacagaaggaattctgaattgagattagttaggaatt 123
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaaactttaataaagacactgtatacagaaggaattctgaattgagattagttaggaatt 323
Query: 124 tttaaattgaaaaaattaactgttgagtgtttaatgacttactagattgttccttaacat 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 tttaaattgaaaaaattaactgttgagtgtttagtgacttactagattgttccttaacat 383
Query: 184 cagaattatcacaaaatattcacaattgtctgcctcccatagataacagtatataaggaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagaattatcacaaaatattcacaattgtctgcctcccatagataacagtatataaggaa 443
Query: 244 tttaaaatattgaagtatattagctataaacatacataaacctgagcaatgctactaagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttaaaatattgaagtatattagctataaacatacataaacctgagcaatgctactaagt 503
Query: 304 ggactgatggtctctctgtctcttgtctgtctgtatttctctctcgctctccctctcttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggactgatggtctctctgtctcttgtctgtctgtatttctctctcgctctccctctcttt 563
Query: 364 ttgtttctcacctatgccccacttctctctttctatttgacttgttgctaaaataaagaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgtttctcacctatgccccacttctctctttctatttgacttgttgctaaaataaagaa 623
Query: 424 tatacttttgtgtggttaagtaaaaagcagattgcttttactgtcttttgtttgaataca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatacttttgtgtggttaagtaaaaagcagattgcttttactgtcttttgtttgaataca 683
Query: 484 tgaaaaacagaagtaagatacagttatttctgagatgcttagggatggaacccacgggat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgaaaaacagaagtaagatacagttatttctgagatgcttagggatggaacccacgggat 743
Query: 544 cctgattgcttgacaagagcacagagcgatgtcctaggcctccattcacttgatggtatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cctgattgcttgacaagagcacagagcgatgtcctaggcctccattcacttgatggtatg 803
Query: 604 tgtagttgagctgattttcaccaagagaatccaatggtactccagttt 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgtagttgagctgattttcaccaagagaatccaatggtactccagttt 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no215_a01.g1 MSMg01no215_a01.g1 CHROMAT_FILE:
MSMg01no215_a01.g1 PHD_FILE: MSMg01no215_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:31 2005
(318 letters)
>mm_chr6_12128112_12128827
Length = 716
Score = 572 bits (296), Expect = e-168
Identities = 312/318 (98%), Gaps = 2/318 (0%)
Strand = Plus / Minus
Query: 1 atggagaactagtacgactctttttaaaattttccatagctcttttagaactttttaaaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 447 atggagaactagtacgactctttttaaaaatttccatagctcttttagaactttttaaaa 388
Query: 61 caggatttctgaccttggttggaaatcccaagaattgctcagagagtgaacacagtactt 120
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 387 caggatttctgaccttggttggaaatcccaagaattgcttagagagtgaatacagtactt 328
Query: 121 ttatgttttctggccttctgattttgatcataaaacccaagaattacttttagaattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttatgttttctggccttctgattttgatcataaaacccaagaattacttttagaattttt 268
Query: 181 ctagtagtatttctgacttggtcagagaattttttttttatcagcttttctgactttgtc 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 267 ctagtagtatttctgacttggtcagagaa--ttttttttatcagcttttctgactttgtc 210
Query: 241 agaaaacccatgagctatccagagagcttttagaatttttactgccagagagagctgtct 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 209 agaaaacccatgagctatccagagagctttttgaatttttactgccagagagagctgtct 150
Query: 301 taaccagagaggtatttt 318
||||||||||||||||||
Sbjct: 149 taaccagagaggtatttt 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
