Query= MSMg01no217_l20.b1 MSMg01no217_l20.b1 CHROMAT_FILE:
MSMg01no217_l20.b1 PHD_FILE: MSMg01no217_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:28 2005
(317 letters)
>mm_chr6_113860777_113861493
Length = 717
Score = 441 bits (228), Expect = e-128
Identities = 287/316 (90%), Gaps = 16/316 (5%)
Strand = Plus / Minus
Query: 6 aattcacttctgtaagttgtcctctgacctccacatgtgccgcacacctaaacaaacaaa 65
|||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 717 aattcacttctgtaagttgtcctctgacctccacgtgtgccgcacacct----------- 669
Query: 66 caaacaaacaaacaaacaaacaaatgtcattttagaaaattaaaagactgttgggtaaat 125
||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||| |
Sbjct: 668 -aaacaaacaaacaaataaataaatgtcatcttagaaaattaaaaggctgttgggtaagt 610
Query: 126 taaattatgtgatagtcccataagaataggacacatgca----cgcacacacacacacac 181
||||||||||||||||||||||||||||||||||||||| ||| | | | | | |||
Sbjct: 609 taaattatgtgatagtcccataagaataggacacatgcacgcgcgcgcgcgcgcgcgcac 550
Query: 182 acacacacacacacacacacacacacacacactgcagagcctcaaattgccactgggggc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 acacacacacacacacacacacacacacacactgcagagcctcaaattgccactgggggc 490
Query: 242 gccatcgctcacattcccttcatccagaaaggattcatatgttctcagcttcaaccataa 301
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 489 gccatcgctcacattcccttcatccagaaaggattcatatggtctcagcttcaaccataa 430
Query: 302 tcttaactaagggtta 317
||||||||||||||||
Sbjct: 429 tcttaactaagggtta 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_l20.g1 MSMg01no217_l20.g1 CHROMAT_FILE:
MSMg01no217_l20.g1 PHD_FILE: MSMg01no217_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:28 2005
(251 letters)
>mm_chr6_113721145_113721795
Length = 651
Score = 424 bits (219), Expect = e-123
Identities = 243/251 (96%)
Strand = Plus / Plus
Query: 1 ttaggtggttaaatgtgttgctgactcatttgtaaggagccttcttatgccggcaggggt 60
||||||||||||||||||||||| |||||||||||||||||||| | || |||||||||
Sbjct: 201 ttaggtggttaaatgtgttgctggctcatttgtaaggagccttccaaggctggcaggggt 260
Query: 61 gagggggggtcagtctggagccagaggaggctgtacagaaggaagtacccagagagaggc 120
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 261 gagggggggtcagtctggagccagaggaggctgcatagaaggaagtacccagagagaggc 320
Query: 121 tggcggggcatgggcaggtggcctggcacacatcaggacaaaccgctgcccagtgatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcggggcatgggcaggtggcctggcacacatcaggacaaaccgctgcccagtgatgtc 380
Query: 181 caggaaggcgataatgtataactcatctgggaggcctgagcccactcactgctggtgaca 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggaaggcgataatgcataactcatctgggaggcctgagcccactcactgctggtgaca 440
Query: 241 actgcagctgt 251
|||||||||||
Sbjct: 441 actgcagctgt 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
