Query= MSMg01no217_p16.b1 MSMg01no217_p16.b1 CHROMAT_FILE:
MSMg01no217_p16.b1 PHD_FILE: MSMg01no217_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:51 2005
(319 letters)
>mm_chr6_76246229_76246947
Length = 719
Score = 530 bits (274), Expect = e-155
Identities = 304/314 (96%)
Strand = Plus / Plus
Query: 5 gaattctttgtttctttgttagttcttattatttctgaggaacttccttttgtttcagaa 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattatttgtttctttgttagttcttattatttctgaggaacttccttttgtttcagaa 264
Query: 65 tctctagggcctcacacttattcctatgatgaagtaaactacacacttaatgaggtgtgc 124
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 tctctaggccctcacacttattcctatgatgaaataaactacacacttaatgaggtgtgc 324
Query: 125 ccatagaaatcttacacaaaaataattcactctgctgaaatattaagtggtattcttttg 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatagaaatcttacacaaaaatgattcactctgctgaaatattaagtggtattcttttg 384
Query: 185 aactttgcttgtccagcaactggggtcgctgaagaaaaatacagcaattcaaagacctaa 244
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 385 aactttgcttgtccagcaactggggttgctgaagaaaaatacagcaatttaaagacctaa 444
Query: 245 aaagtttactattatagttcaaggacattcttgtttacttaaagaaatagtatatcaaac 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 aaagtttactattatagttcaaggacattcttggcaacttaaagaaatagtatatcaaac 504
Query: 305 tgaattacaaaaat 318
|||| |||||||||
Sbjct: 505 tgaagtacaaaaat 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_p16.g1 MSMg01no217_p16.g1 CHROMAT_FILE:
MSMg01no217_p16.g1 PHD_FILE: MSMg01no217_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:51 2005
(289 letters)
>mm_chr6_76397648_76398336
Length = 689
Score = 493 bits (255), Expect = e-144
Identities = 286/309 (92%), Gaps = 20/309 (6%)
Strand = Plus / Minus
Query: 1 caagaagtctacggtttctgggtagcacaccagtcatctaaacaagaacttttcctgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagaagtctacggtttctgggtagcacaccagtcatctaaacaagaacttttcctgtag 262
Query: 61 gcctcaaagtgattttgaattctgtgaaaatgtcaataagacatttaatgtattttgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctcaaagtgattttgaattctgtgaaaatgtcaataagacatttaatgtattttgtta 202
Query: 121 ctatttttattctaaaaatatttaatttattataaat--------------------tgt 160
|||||||||||||||||||| |||||||||||||||| |||
Sbjct: 201 ctatttttattctaaaaatacttaatttattataaattgtgtgtgtgtgtgtgtgtgtgt 142
Query: 161 gtgtgtgtgtgtttgcatggggtgtgtttttctcctcaaaaaagtgactgtaaccactta 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtgtgtgtgtgtttgcatggggtgtgtttttctcctcaaaaaagtgactgtaaccactta 82
Query: 221 agccagagaccttgtgttctctggggctatgtttacaggaagttaggttctgcccaatgc 280
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 81 agccagagaccttgtgttctctggggctatggttacaggaagttaggttctgcccagtgc 22
Query: 281 tgaggactt 289
|||||||||
Sbjct: 21 tgaggactt 13
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
