Query= MSMg01no237_d12.b1 MSMg01no237_d12.b1 CHROMAT_FILE:
MSMg01no237_d12.b1 PHD_FILE: MSMg01no237_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:59 2005
(244 letters)
>mm_chr6_84607853_84608496
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 ctcctgctctagcttctcttgtgttggccttgcaggagtacactttgccccattctcatg 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 444 ctcctgctctagcttctcttgtgttggccttgcaggagtacaccatgccccattctcatg 385
Query: 61 cctctctataatgggcataaaagcacatcccatcaagtattacttacactcataaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctctctataatgggcataaaagcacatcccatcaagtattacttacactcataaaataa 325
Query: 121 agcctttttgtttaaaagaaaaaaaaagatggcaattttcaatgtactatttcagactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcctttttgtttaaaagaaaaaaaaagatggcaattttcaatgtactatttcagactac 265
Query: 181 atgtgtcattgtttcttcctgtaagaaaattctgataggcattcctccccagtaaaaggg 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acgtgtcattgtttcttcctgtaagaaaattctgataggcattcctccccagtaaaaggg 205
Query: 241 gtag 244
||||
Sbjct: 204 gtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no237_d12.g1 MSMg01no237_d12.g1 CHROMAT_FILE:
MSMg01no237_d12.g1 PHD_FILE: MSMg01no237_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:59 2005
(238 letters)
>mm_chr6_84480316_84480952
Length = 637
Score = 402 bits (208), Expect = e-117
Identities = 229/236 (97%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 1 ggtccctcctttattaacccaaagaaatgacatagattctgacagtggttggcatctaag 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 201 ggtccctcctttattaacccaaagaaatgacatagattctgacggtggttggcatcttag 260
Query: 61 gagtcaggccagtcatgtggcctctcaaatgtcacccatggtcagcaaacttcacccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtcaggccagtcatgtggcctctcaaatgtcacccatggtcagcaaacttcacccaca 320
Query: 121 cagtctcatttctgaacaaattttcaacattctacacatcgaaagggccacatggcaaag 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtctcatttctgaacaaattt-caacattctacacatcgaaagggccacatggcaaag 379
Query: 181 gattgccaaccattattaaggatgctgaaaagagtgaaacagggctgattagttat 236
||||||||||||| || |||||||||||||||| | ||||||||||||||||||||
Sbjct: 380 gattgccaaccatgatgaaggatgctgaaaagaattaaacagggctgattagttat 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 637
Length adjustment: 9
Effective length of query: 229
Effective length of database: 628
Effective search space: 143812
Effective search space used: 143812
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
