| Query= MSMg01no237_h11.g1 MSMg01no237_h11.g1 CHROMAT_FILE:
MSMg01no237_h11.g1 PHD_FILE: MSMg01no237_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:18 2005
(479 letters)
>mm_chr6_77788508_77789386
Length = 879
Score = 919 bits (475), Expect = 0.0
Identities = 478/479 (99%)
Strand = Plus / Plus
Query: 1 agtagtttcatcactaagagagttagtttgtagtctcaaatcatgataatggtttactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagtttcatcactaagagagttagtttgtagtctcaaatcatgataatggtttactga 260
Query: 61 ttgagtctggttttcctagggaaggcatgggcagatggtgccagttaacagagggtaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagtctggttttcctagggaaggcatgggcagatggtgccagttaacagagggtaaat 320
Query: 121 gtatgccaagctcagtaaaattacaccacagtgctcttggatatctgtgattgaaagcag 180
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Sbjct: 321 gtatgccaagctcagtaaaattacaccacagtgctcttggatatctgtgattgaaagcag 380
Query: 181 ctgtctctaacagtggggagatggataactactattgtattccagggtggtttgtgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtctctaacagtggggagatggataactactattgtattccagggtggtttgtgtgtg 440
Query: 241 taaaataaacaactaagctaggattacacagatatattttctcatgtacagtgattcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaataaacaactaagctaggattacacagatatattttctcatgtacagtgattcttt 500
Query: 301 gtctctgaaaaatatcctcaatgtaattaaaggtgatttttacctaggttgcatcttgga 360
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Sbjct: 501 gtctctgaaaaatatcctcaatgtaattaaaggtgatttttacctaggttgcatcttgga 560
Query: 361 ttattttgaaaataaaaaatgctagtagactcatatatgcactgcattcttacatcttta 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 ttattttgaaaataaaaaatgctagtagattcatatatgcactgcattcttacatcttta 620
Query: 421 atagcttaagtatcacttttaaatctcggaatgtgtgtgtgtgtgtgtgtgtgtgtgtg 479
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Sbjct: 621 atagcttaagtatcacttttaaatctcggaatgtgtgtgtgtgtgtgtgtgtgtgtgtg 679
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 452 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 479
||||||||||||||||||||||||||||
Sbjct: 29 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 56
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 452 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 479
||||||||||||||||||||||||||||
Sbjct: 31 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 58
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 452 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 479
||||||||||||||||||||||||||||
Sbjct: 33 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 60
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 452 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 479
||||||||||||||||||||||||||||
Sbjct: 35 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 62
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 452 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 479
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Sbjct: 37 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 64
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 452 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 479
||||||||||||||||||||||||||||
Sbjct: 39 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 66
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 452 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 479
||||||||||||||||||||||||||||
Sbjct: 41 tgtgtgtgtgtgtgtgtgtgtgtgtgtg 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 8
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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