Query= MSMg01no261_h20.b1 MSMg01no261_h20.b1 CHROMAT_FILE:
MSMg01no261_h20.b1 PHD_FILE: MSMg01no261_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:53 2005
(635 letters)
>mm_chr6_68490034_68491068
Length = 1035
Score = 1135 bits (587), Expect = 0.0
Identities = 620/631 (98%)
Strand = Plus / Plus
Query: 5 gaattccctcttccctgacgttcctaacatgtaccaagcttacaaaacaccaacaaggat 64
||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gaattccctcttcccagaagttcctaacatgtaccaagtttacaaaacaccaacaaggat 264
Query: 65 aagagctttaattagattgtattaacagattaccttatatttcatattgtatttctgagg 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 aagagctttaattagattgtattaacagattaccttgtatttcatattgtatttctgagg 324
Query: 125 cttaacatattgtcttttcttttgtgtttgcacatagctattgaatttctatatgtgaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 cttaacatattgtcttttcttttgtgtttgcacatagctattgaatttctatatgcgaaa 384
Query: 185 gtaatttattattttctttttaacatatgtgttgctgtctctctttatgagtaagcatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 gtaatttattattttctttttaacatatgtgttgctgtctctctttatgaggaagcatat 444
Query: 245 gtgggtaacctcatagaatgaaaatatgtataaggtcccctggtgctggaattataaaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgggtaacctcatagaatgaaaatatgtataaggtcccctggtgctggaattataaaca 504
Query: 305 gttaagaacagaccaacatatgtgctgtttactaaacacaggttctctggaagaacagcg 364
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttaagaacagcccaacatatgtgctgtttactaaacacaggttctctggaagaacagcg 564
Query: 365 aacacttctaatggttgaggcatttgttacactccagaaagattttttctacatatggtc 424
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 565 aacacttctaatggttgaggcatttatcacactccagaaagattttttctacatatggtc 624
Query: 425 ctaaaattatttcactgagtgaactgatgagatgtctcaacaaataaaaatgcctgccac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctaaaattatttcactgagtgaactgatgagatgtctcaacaaataaaaatgcctgccac 684
Query: 485 caagccaagtaacttatcatttttcttggacaaatatggtaagaaagaactgacacctaa 544
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 685 caagccaagtaacttattatttttcttggacaaatatagtaagaaagaactgacacctaa 744
Query: 545 gaattactgtctaccctcaccctcaatgtgtgtgccattaaatgaacatgccaacacagg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaattactgtctaccctcaccctcaatgtgtgtgccattaaatgaacatgccaacacagg 804
Query: 605 catataagtaagtaacaaataagtaagtgaa 635
|||||||||||||||||||||||||||||||
Sbjct: 805 catataagtaagtaacaaataagtaagtgaa 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_h20.g1 MSMg01no261_h20.g1 CHROMAT_FILE:
MSMg01no261_h20.g1 PHD_FILE: MSMg01no261_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:54 2005
(246 letters)
>mm_chr6_68621403_68622048
Length = 646
Score = 406 bits (210), Expect = e-118
Identities = 236/246 (95%), Gaps = 3/246 (1%)
Strand = Plus / Plus
Query: 1 ctgtcttgggtgatgaacatcagtgcaagctaagtaaatcttctcttcccaaactttcta 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctgtcttgggtgatgaacagcagtgcaagctaagtaaatcttctcttcccaaactttcta 263
Query: 61 ttggccatggtgggttttgggtttttgttttgttctgttgtgttttgttttgttctgtgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 264 ttggccatggtgggttttgggtttttgttttgttctgttgtgttttgttttgttgtatgt 323
Query: 121 tttgttgttgttgttgttttttagcaactgaaattctgagacaaatgattctcacaggtc 180
||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 324 tttgttgttgttgtt---ttttagcaacagaaattctgagacaaatgattttcacaggtc 380
Query: 181 cccaacaagttcagtggcagtgggtcaggaagagatttcacactaataattcatagaatg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 cccaacaagttcagtggcagtgggtcaggaagagatttcacactaataatccatagaatc 440
Query: 241 taggct 246
||||||
Sbjct: 441 taggct 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
