Query= MSMg01no264_c21.b1 MSMg01no264_c21.b1 CHROMAT_FILE:
MSMg01no264_c21.b1 PHD_FILE: MSMg01no264_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:17 2005
(243 letters)
>mm_chr6_52680216_52680858
Length = 643
Score = 431 bits (223), Expect = e-125
Identities = 238/243 (97%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 1 ttcccagaaattcctctcttatcttaaatacgaaatgcaacttttatagccagactgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ttcccagaaattcctctcttatcttaaatacgaaatgcaacttttatagggtgactgaaa 260
Query: 61 cattttgtagtgacaactgcctctgatcagggtttttagcctcgtatttgaatgttagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattttgtagtgacaactgcctctgatcagggtttttagcctcgtatttgaatgttagtc 320
Query: 121 agagacactgaagtaaaccctgctcctaggaatgcagttagcactgatgtgcagggcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagacactgaagtaaaccctgctcctaggaatgcagttagcactgatgtgcagggcttt 380
Query: 181 tgaatacttgtcagca-cacccttatctcaagccctgcacatgatgggcatttgctcccc 239
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaatacttgtcag-agcacccttatctcaagccctgcacatgatgggcatttgctcccc 439
Query: 240 atg 242
|||
Sbjct: 440 atg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_c21.g1 MSMg01no264_c21.g1 CHROMAT_FILE:
MSMg01no264_c21.g1 PHD_FILE: MSMg01no264_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:17 2005
(295 letters)
>mm_chr6_52844674_52845368
Length = 695
Score = 543 bits (281), Expect = e-159
Identities = 290/293 (98%)
Strand = Plus / Minus
Query: 1 ttggaatagaaaaaaaaatgatagagtgaacgtgcgattcttaacttggacataatgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttggaatagaaaaaaaaatgatagagtgaacgtgcgattcttaacttggacataatgaag 434
Query: 61 aaagctggttctactgcacagttatatagtctgagagtcaaaagcaacgccaacctgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaagctggttctactgcacagttatatagtctgagagtcaaaagcaacgccaacctgatt 374
Query: 121 atttttaccactcgtggcctgggccaccatgtctctccctttctccgtcacctgttaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atttttaccactcgtggcctgggccaccatgtctctccctttctccgtcacctgttaatg 314
Query: 181 cacgagtttgtatatctcaaatccaccattgtggtaaacactgtgctaaggtgtttgaaa 240
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 313 cacgagtttgtatatctcaaatccaccattgtgctaaacactgtgcaaaggtgtttgaaa 254
Query: 241 ctgtgtcagtcgtcacatctgagtgcagcaaagagactcctaatcatgtgatc 293
|||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 253 ctgtgtcagtcgtcacatctgagttcagcaaagagactcctaatcatgtgatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
