CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAAGAGCCGCGGAA
TTCTCAATTGACAACAAAAAATCTGTGCTTTTGGGGGGACGGGAAACATC
CTCTGGTGATTCTGACCCCTAAATCTAGAACAGCCCAATGCCTCAAAGAC
TCTGCCCATTCTTCTCCCATTGCTTTTCAATGCAACCAGAAATGATTGAC
ACTGCCCTGGGCCTGGGAATCCCAGGGCAAGGGCCAAGCACTCATCTGAC
AGGCCAGGCTTACATAGCTCAAGACACAATGTTTGGTGAGGGCCTGCTTT
GTGCCATGCACTATTTTAGGTAGCTAGGAATGTGGTAGAAATCGAGGCAG
AGAAAGTCATTGTATTCTACTGCGGGAGATGACAGCAACCATTTCTGGTT
GCGGGAAATGCTAACGAAGATGGATTCTATATGCTAGAGAACAACACTGG
AGACTGATTCCACCTGGGAAGGGGAATCAGATAAGCACAGACCTAGGAAA
TGCATGGGAATGGTACATGCAAAGTCAGGCAGGACGGATCTTGGAATGTG
AGGTGACCTAAGCCTCACATGACTGGACACTGTTGGGCATGGAGGGTTTG
GGGCAGGGAGGAAGCAGGGTTAGGAGGGTGTGNCNTTACNTTCTTTTTTC
TGNNGGTCNTTCNTGCCTCCTTGTCCCCCTCCTTAGTTTTTCCTTGTTCC
TTTTCTCCTTTATTCTT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTCCGAAATTCCACAGCACTTGGCGGTGGCTTGTTCCT
GGGACTTTGGCCCCTACTTAGCACTCTATCTCAAATGTCCTGTAGCTGCT
TGGTGTTAACTTTCTCTTCTCTGCTAGCATAATTGAAACCCTTATCAAGG
CTTTAATGATTCACTTAACTCATCCTCCAAACAAGACAGTGACGTCATCA
TAGCCTTTATTCTTCAAAGCAGGCAGTTGTTACTCCTGTTAAAGAAATGA
TCATGCTGAAGCCCACAAGGTAGAACTCTCTGCATCCTGAATGGGCTTCA
CTGAGGTCACAGAATGTATGCTCACAGTCCAGGGACAGCTAGTGAATGGC
TTTTGTCACAGTTGTTTGCCACAGTTGTTTGACAGAAGTTCTCACACCAC
AAGTAGAGAACACAGAATTGGGGGGGGACGTTTCCATCTGAAGAAAGAAC
CGGGCAGGGGGGTGTGGTGGACGAGAAAGTGTGGGCAGTGAGAGCGGAGT
AGAAGGTGGAGATGTTTTGGTGACTAGGAGGAGAGGGGAGGAGGGAAGAA
GGAGAAGGAAAGACGGAAGAGAAGGAGAAAAAGGAAAACCAAAATACAAA
GAAAAAAAAAAAAAAATAAAACAAAAAAAAAAAGAGAAAAACAAAAAGAA
AATAAAAAAGAAAAAAAAAAGAGGAAAAAAAGAAATCAAGAAGAAGGGAA
AAAAAAAGAAGAGGGGGGGA

Query= MSMg01no264_k01.b1 MSMg01no264_k01.b1 CHROMAT_FILE:
MSMg01no264_k01.b1 PHD_FILE: MSMg01no264_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:52 2005
         (240 letters)



>mm_chr6_97206632_97207271
          Length = 640

 Score =  441 bits (228), Expect = e-128
 Identities = 237/240 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagatgacagcaaccatttctggttgcgggaaatgctaacgaagatggattctatatgc 60
           |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 201 ggagatgacagcaaccatttctggttgcaggaaatgctaaggaagatggattctatatgc 260

                                                                       
Query: 61  tagagaacaacactggagactgattccacctgggaaggggaatcagataagcacagacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagagaacaacactggagactgattccacctgggaaggggaatcagataagcacagacct 320

                                                                       
Query: 121 aggaaatgcatgggaatggtacatgcaaagtcaggcaggacggatcttggaatgtgaggt 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaaatgcatgggaatggcacatgcaaagtcaggcaggacggatcttggaatgtgaggt 380

                                                                       
Query: 181 gacctaagcctcacatgactggacactgttgggcatggagggtttggggcagggaggaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacctaagcctcacatgactggacactgttgggcatggagggtttggggcagggaggaag 440


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space:   145761
Effective search space used:   145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no264_k01.g1 MSMg01no264_k01.g1 CHROMAT_FILE:
MSMg01no264_k01.g1 PHD_FILE: MSMg01no264_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:52 2005
         (236 letters)



>mm_chr6_97359427_97360062
          Length = 636

 Score =  441 bits (228), Expect = e-128
 Identities = 234/236 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctcaaatgtcctgtagctgcttggtgttaactttctcttctctgctagcataattgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atctcaaatgtcctgtagctgcttggtgttaactttctcttctctgctagcataattgaa 377

                                                                       
Query: 61  acccttatcaaggctttaatgattcacttaactcatcctccaaacaagacagtgacgtca 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 376 acccttatcaaggctttaatgattcacttaactcatcctccaaacaagacagtgacatca 317

                                                                       
Query: 121 tcatagcctttattcttcaaagcaggcagttgttactcctgttaaagaaatgatcatgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 316 tcatagcctttattcttcaaagcaggcagttgttactcctgttaaagaaatgatcgtgct 257

                                                                   
Query: 181 gaagcccacaaggtagaactctctgcatcctgaatgggcttcactgaggtcacaga 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaagcccacaaggtagaactctctgcatcctgaatgggcttcactgaggtcacaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space:   142329
Effective search space used:   142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)