Query= MSMg01no267_e21.b1 MSMg01no267_e21.b1 CHROMAT_FILE:
MSMg01no267_e21.b1 PHD_FILE: MSMg01no267_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:20 2005
(289 letters)
>mm_chr6_88570091_88570779
Length = 689
Score = 516 bits (267), Expect = e-151
Identities = 282/289 (97%), Gaps = 4/289 (1%)
Strand = Plus / Minus
Query: 1 gtgtcaatccatggtaaacagcacctgtgattccctgggcacaattctcacacctgaacc 60
||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 451 gtgtcaatccatggtaaacagcacctgtgataccctgggcacaattctcagatctgaacc 392
Query: 61 aaaacaaacaaaaacaaacaaacataaaccatagggttttttgtttgtttgtttgttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaaacaaacaaaaacaaacaaacataaaccatagggttttttgtttgtttgtttgttttt 332
Query: 121 tactccaagtaatagctgatgtgattatgtgtcaagacacctttataatgtgattttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tactccaagtaatagctgatgtgattatgtgtcaagacacctttataatgtgattttgac 272
Query: 181 aagtcatagtgggcataagagagttcagactcacaacaatctcataattgcccataactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aagtcatagtgggcataagagagttcagactcacaacaatctcataattgcccataactg 212
Query: 241 gatactcacagataaataaaataaataaataaatcagaggtttgctttt 289
|||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 211 gatactcacagataaata----aaataaataaatcagaggtttgctttt 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no267_e21.g1 MSMg01no267_e21.g1 CHROMAT_FILE:
MSMg01no267_e21.g1 PHD_FILE: MSMg01no267_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:20 2005
(591 letters)
>mm_chr6_88375803_88376793
Length = 991
Score = 1065 bits (551), Expect = 0.0
Identities = 581/591 (98%)
Strand = Plus / Plus
Query: 1 caggctggtgtggattgctagggaggtaaaactgcagttctcatcaccagggtccaggct 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 caggctggtgtggattgctagggaggtaaaactgcagttctcagcaccagggtccaggct 260
Query: 61 actcatcccaacaacttccagtttcactttgtgcgatgggagtcttttcaggaaaagtgt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcatcccaaaaacttccagtttcactttgtgcgatgggagtcttttcaggaaaagtgt 320
Query: 121 cattcattgtggggaaataaaatgacttgtatattttaaatctcctccaaaaagacaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattcattgtggggaaataaaatgacttgtatattttaaatctcctccaaaaagacaaat 380
Query: 181 gctttgagatgatttaaaaagccatgcctccaaaatgataaaaccttcgtggggaagacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctttgagatgatttaaaaagccatgcctccaaaatgataaaaccttcgtggggaagacc 440
Query: 241 ggcccatgagtctggactccagaacttcattggagcagcaacagtggctgcactgcattt 300
|||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||
Sbjct: 441 ggcccatgagtctggactccaggacttcgttggagcagcgtcagtggctgcactgcattt 500
Query: 301 tgctcagtttctcctgtatgagtgtgtacacactagctcgcagcccgcgctgccctttca 360
||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 501 tgctcagtttctcctgtatgagtgtgtacacactagctcgcagtctgtgctgccctttca 560
Query: 361 cactttagctctccatgaaacctaaatgtatatatatatctgtcttgtaagacaaattga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cactttagctctccatgaaacctaaatgtatatatatatctgtcttgtaagacaaattga 620
Query: 421 caaaaaaatatgcctttctaattgtaaagacaccttaaacccactgactttctgccctgt 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 caaaaaaatatgcctttctaattgtaaagacactttaaacccactgactttctgccctgt 680
Query: 481 ttaagcaagtggcagattgcaagagtgaagcgcgtgggaggttctccagaagctgatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaagcaagtggcagattgcaagagtgaagcgcgtgggaggttctccagaagctgatgaa 740
Query: 541 ctgataggagctcctgccatccctaaaccgttccttaccatcctcattgtc 591
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgataggagctcctgccatccctaaaccgttccttaccatcctcattgtc 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
