Query= MSMg01no269_a03.b1 MSMg01no269_a03.b1 CHROMAT_FILE:
MSMg01no269_a03.b1 PHD_FILE: MSMg01no269_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:23 2005
(625 letters)
>mm_chr6_133583933_133584957
Length = 1025
Score = 1118 bits (578), Expect = 0.0
Identities = 611/622 (98%)
Strand = Plus / Minus
Query: 4 ggaattccattgccctacctcataaaatgctagctgcatggtactcagtgccccaacctc 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ggaattccattgccctagttcataaaatgctagctgcatggtactcagtgccccaacctc 766
Query: 64 agttgtcctgtctgacctttctctgtcagtttttctctagatactattgttattacttac 123
||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 agtcgtcctgtctgagttttctctgtcagtttttctctagatactattgttattacttac 706
Query: 124 ctctaatgagttcatagctcatacttctatttcatgatacattaaacacttcactcttcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ctctaatgagttcatagctcatacttctatttcatgatacattaaacacttcactcttcc 646
Query: 184 tggagaatggaaaaaacctgagaaggacttcggattggtgacacttggcagactcacatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tggagaatggaaaaaacctgagaaggacttcggattggtgacacttggcagactcacatg 586
Query: 244 ctctcttttgaaacaatggattgtgatgatttcctcagtactgccacattcaaggtcatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctctcttttgaaacaatggattgtgatgatttcctcagtactgccacattcaaggtcatc 526
Query: 304 caaattacatgagtatattatcctctgtatctccttcagtccttctctctaccctttccc 363
||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caaattacatgagcagatcagcctctgtatctccttcagtccttctctctaccctttccc 466
Query: 364 ttacctgaagattttccatgtttcatttgtcaacacacacatcttcaagttccctccctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttacctgaagattttccatgtttcatttgtcaacacacacatcttcaagttccctccctc 406
Query: 424 ctaggatctttgactaagattctgtcttctgagaaactcatatgcatgaaaataattttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctaggatctttgactaagattctgtcttctgagaaactcatatgcatgaaaataattttc 346
Query: 484 actacaatgccctgcctgtgccccggcatctgcttttctacttaactttttctttttgct 543
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 actacaatgacctgcctgtgccccggcatctgcttttctacttaactttttctttttgct 286
Query: 544 actcttctcccacacctgatcaattctgataacccattgaacatgaagccctagctgttc 603
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 actcttctcccacccctgatcaattctgataacccattgaacatgaagccctagctgttc 226
Query: 604 cttctcaggaattcatgaggcg 625
||||||||||||||||||||||
Sbjct: 225 cttctcaggaattcatgaggcg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_a03.g1 MSMg01no269_a03.g1 CHROMAT_FILE:
MSMg01no269_a03.g1 PHD_FILE: MSMg01no269_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:23 2005
(646 letters)
>mm_chr6_133243310_133244357
Length = 1048
Score = 1220 bits (631), Expect = 0.0
Identities = 643/647 (99%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 2 tcatttcattttgcatttgtgttagtgtatacattaatagatattcatgaacaagatgga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcatttcattttgcatttgtgttagtgtatacattaatagatattcatgaacaagatgga 261
Query: 62 gaaattgtggattttctctgttttctctttgcttcccaattgctatgtaattgattaaag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaaattgtggattttctctgttttctctttgcttcccaattgctatgtaattgattaaag 321
Query: 122 gaatagcaaattttcaccaggtatttagtatatttgctggacatcattattgttgcttgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaatagcaaattttcaccaggtatttagtatatttgctggacatcattattgttgcttgt 381
Query: 182 tttctgtattaaaatatataggtattgaactgctttcatttcagagatggcaaagtctaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttctgtattaaaatatataggtattgaactgctttcatttcagagatggcaaagtctaa 441
Query: 242 ttaaaattctttgaacattcaaaattttatactgtgccgtgaagtacactttccaaccat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttaaaattctttgaacattcaaaattttatactgtgccgtgaagtacactttccaaccat 501
Query: 302 cctgatgttaatgtactttccttattattattcttttaacattggaaatgcctaatatgg 361
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 502 cctgatgttaatgtactttccttattattattcttttgacattggaaatgcctaatatgg 561
Query: 362 taaataagtctccaaatctttttgattgccaggtgtagggtaca-tactcaaaccagggt 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 562 taaataagtctccaaatctttttgattgccaggtgtagggtacaatactcaaaccagggt 621
Query: 421 tatgaatacaaaaaactctgtatttttggaatgtggaattagaaagccaagatgcagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tatgaatacaaaaaactctgtatttttggaatgtggaattagaaagccaagatgcagata 681
Query: 481 tctgggagaagaagttagcatttggcagacatgttcggagggaaaggactttgtgatcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tctgggagaagaagttagcatttggcagacatgttcggagggaaaggactttgtgatcag 741
Query: 541 gttagggaaaaaaaa-taaggaatatctttgatcaaagtgctcacatcttctggcccttt 599
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gttagggaaaaaaaaataaggaatatctttgatcaaagtgctcacatcttctggcccttt 801
Query: 600 ctatgcagaccctgcagagaaaacccaggactcagagttaggtcctt 646
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctatgcaggccctgcagagaaaacccaggactcagagttaggtcctt 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1048
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1038
Effective search space: 660168
Effective search space used: 660168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
