Query= MSMg01no269_b05.b1 MSMg01no269_b05.b1 CHROMAT_FILE:
MSMg01no269_b05.b1 PHD_FILE: MSMg01no269_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:27 2005
(322 letters)
>mm_chr6_88338168_88338888
Length = 721
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Plus
Query: 5 gaattccttcatgaaaaggatggaattagcatacggcctcagctgccaagtgaggccatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcatgaaaaggatggaattagcatacggcctcagctgccaagtgaggccatt 264
Query: 65 gaagcaagcaatgtaactcgagttcaagatacaattagacatttttttggatggagactg 124
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaagcaagcaatgtaaat-gagttcaagatacaattagacatttttttggatggagactg 323
Query: 125 gggactgaagaggcaccgcaggcctcatttcagaaggggcagcaggaacacatctcactg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggactgaagaggcaccgcaggcctcatttcagaaggggcagcaggaacacatctcactg 383
Query: 185 tgaagggctgcagagtccacaatgtcctgtgggcccaacagttagcaacttagggatgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaagggctgcagagtccacaatgtcctgtgggcccaacagttagcaacttagggatgaa 443
Query: 245 atcaatgagaggcctgccaggacacagaggcccctggaggaagtggtaggcaggacaggc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcaatgagaggcctgccaggacacagaggcccctggaggaagtggtaggcaggacaggt 503
Query: 305 cagtgtgtcagggaaaca 322
||||||||||||||||||
Sbjct: 504 cagtgtgtcagggaaaca 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 721
Length adjustment: 9
Effective length of query: 313
Effective length of database: 712
Effective search space: 222856
Effective search space used: 222856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_b05.g1 MSMg01no269_b05.g1 CHROMAT_FILE:
MSMg01no269_b05.g1 PHD_FILE: MSMg01no269_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:28 2005
(291 letters)
>mm_chr6_88504390_88505080
Length = 691
Score = 520 bits (269), Expect = e-152
Identities = 290/305 (95%), Gaps = 14/305 (4%)
Strand = Plus / Minus
Query: 1 acataggtacacatgcatgtgtacgtgcacgcat----gcgcgcgcgcacacacaca--- 53
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 563 acataggtacacatgcatgtgtacgtgcacgcatgtgcgcgcgcgcgcacacacacacac 504
Query: 54 -------cacactttataagaagatgaattcaagaagcaaagcatggaaaggtgatgtca 106
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acacacgcacactttataagaagatgaattcaagaagcaaagcatggaaaggtgatgtca 444
Query: 107 accccaccaaaaggagaaacaatctaaagtacaaacgccagggcgcctgtatgtgaaggc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 accccaccaaaaggagaaacaatctaaagtacaaacgccagggcgcctgtatgtgaaggc 384
Query: 167 agccaacccaagcagacttttttcaggtgtgtgtccctgaggcctgtacctccgtgtcct 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agccaacccaagcagacttttttcaggtgtgtgtccctgaggcctgtacctccgtgtcct 324
Query: 227 ttctattacttgaatctgcagtgtgccccaaaagttgtatgctaaaggcttcgtcttcag 286
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 323 ttctattacttgaatctgcagtgtgccccaaaagttgtaggctaaaggcttcgtcttcag 264
Query: 287 tttgg 291
|||||
Sbjct: 263 tttgg 259
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
