Query= MSMg01no271_p21.b1 MSMg01no271_p21.b1 CHROMAT_FILE:
MSMg01no271_p21.b1 PHD_FILE: MSMg01no271_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:00 2005
(321 letters)
>mm_chr6_17026664_17027385
Length = 722
Score = 572 bits (296), Expect = e-168
Identities = 311/316 (98%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtcagagggcattgaccactgccatactcttctgtaacacagaagtttaaggg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtcagagggcattgaccactgccatactcttctgtaacacagaagtttaaggg 264
Query: 65 aagcaatacagagcttagtgtttccacatgcacatttcagtcccagctttgatacttgcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagcaatacagagcttagtgtttccacatgcacatttcagtcccagctttgatacttgcc 324
Query: 125 tgttgatttcgacaggtttttttcccctccccatctttggttttgataaactaatctgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgttgatttcgacaggtttttttcccctccccatctttggttttgataaactaatctgtg 384
Query: 185 agatgccaatagtgctctgtaattgctgacttttttttttt-aattctttgttaaggatg 243
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 385 agatgccaatagtgctctgtaattgctgacttttttttttttaattctctgttaaggata 444
Query: 244 cttaggtgcctcttagcactaataaattcatgtgcagaggcccagaattgtatcaggatt 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 cttaggtgcctcttagcactaataaatacatgtgcagaggcccagaattgtatcaggatt 504
Query: 304 tttaatgtatcttgaa 319
|||||| |||||||||
Sbjct: 505 tttaatatatcttgaa 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 722
Length adjustment: 9
Effective length of query: 312
Effective length of database: 713
Effective search space: 222456
Effective search space used: 222456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_p21.g1 MSMg01no271_p21.g1 CHROMAT_FILE:
MSMg01no271_p21.g1 PHD_FILE: MSMg01no271_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:00 2005
(293 letters)
>mm_chr6_17186237_17186929
Length = 693
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%)
Strand = Plus / Minus
Query: 1 ttttcatgatgagaaaatgatacaagtccttttcatctcttgtgcatactcacaataaga 60
||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 490 ttttcttgatgagaaaatgatacaagtccttttcatctcttgtgcatacttaaaataaga 431
Query: 61 atatccgtgacaatcctgccatgccttgatgaattcagcattaggacttacactctcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atatccgtgacaatcctgccatgccttgatgaattcagcattaggacttacactctcata 371
Query: 121 gctcattcttcaatggaactttcaaaaattgacttaaatgtactgcaacttctctttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gctcattcttcaatggaactttcaaaaattgacttaaatgtactgcaacttctctttcct 311
Query: 181 gaaaggcatttttcagatttgtgtgtcaactagagagctctagagtaattcacagaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaaaggcatttttcagatttgtgtgtcaactagagagctctagagtaattcacagaggtt 251
Query: 241 tctaatgaaaatatctaatctaaaggccaagtaagaactataattcaaaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctaatgaaaatatctaatctaaaggccaagtaagaactataattcaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
