Query= MSMg01no272_a20.b1 MSMg01no272_a20.b1 CHROMAT_FILE:
MSMg01no272_a20.b1 PHD_FILE: MSMg01no272_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:05 2005
(377 letters)
>mm_chr6_111942080_111942857
Length = 778
Score = 677 bits (350), Expect = 0.0
Identities = 371/378 (98%), Gaps = 1/378 (0%)
Strand = Plus / Plus
Query: 1 ctagacaaaggtaaaggagaactactctcccctgctagaatccccaaataccctctcaaa 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagacaaaggtaaagaagaactactctcccctgctagaatccccaaataccctctcaaa 260
Query: 61 gacttaaaactcaaagtgcttctagtgatactcttatggcctacaaagctacaattagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacttaaaactcaaagtgcttctagtgatactcttatggcctacaaagctacaattagga 320
Query: 121 agaagttaaaacttacttttttttaaattagatattttc-ttttttttgaagttaataag 179
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 321 agaagttaaaacttacttttttaaaaattagatattttctttttttttgaagttaataag 380
Query: 180 tttttaattttgtaaagttccttaaataagtgatctttggttatactttaacttctttgt 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tttttaattttgtaaagttccttaaataagtgatctttagttatactttaacttctttgt 440
Query: 240 gtagcacggttgggttattaaaacactgtaggagataaactaagcttctgttaattttaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtagcacggttgggttattaaaacactgtaggagataaactaagcttctgttaattttaa 500
Query: 300 taccaagttacactttattaactgacaaagagaaagagagagagctgctatattcccaca 359
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 501 taccaagttacactttattaactgacaaagataaagagagaaagctgctatattcccaca 560
Query: 360 tccagttttctatataaa 377
||||||||||||||||||
Sbjct: 561 tccagttttctatataaa 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 778
Length adjustment: 9
Effective length of query: 368
Effective length of database: 769
Effective search space: 282992
Effective search space used: 282992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_a20.g1 MSMg01no272_a20.g1 CHROMAT_FILE:
MSMg01no272_a20.g1 PHD_FILE: MSMg01no272_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:05 2005
(292 letters)
>mm_chr6_112063788_112064479
Length = 692
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 1 atcattgttcagacatttagctttgctctcttagaggtatagaagtattttattttattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atcattgttcagacatttagctttgctctcttagaggtatagaagtattttattttattt 433
Query: 61 tctttagcaaggttcaatgtgcttgccaaaatacaatagcgattgttagctaatcattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tctttagcaaggttcaatgtgcttgccaaaatacaatagcgattgttagctaatcattac 373
Query: 121 tgtgtgtgaagcagacaaaacctctttaaaatgaatgtaggtttgttctgcagcgacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgtgtgtgaagcagacaaaacctctttaaaatgaatgtaggtttgttctgcagcgacagc 313
Query: 181 aattctgactcactgtttcctatcattttatggcagtggctgaagctaaagcttgactta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aattctgactcactgtttcctatcattttatggcagtggctgaagctaaagcttgactta 253
Query: 241 agcctttgttaagagctaagagaaaaccatccatatcacgagaacctctttc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agcctttgttaagagctaagagaaaaccatccatatcacgagaacctctttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
