XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAG
AAGTTACATGTTACTCAACATTTTGTATTTTACTTTATAAATATTAAGAC
TCATGGGGTTAAGCCGGAGTATTTTTCGGCAATTTTGGATGAATAGAGGT
TAAAAGGTATCCTGTGGAAGGGTCTTTTCAATAATCAGTGGTTAGAAGCT
TGAGGAAACTTTGGTACCCAGGAAATATTTAGTGACATGTATGCTTTCTG
TAGCTGAAATGAATACTCTACAAACAAAAAGTTTTAAACAAATTAAGGAT
GATGTTAAACATTTTTGTGATATCTGCAGTATAATTTATAGAATCATTTA
TCTATTTACTATAGTTTTTAAAACTGTGTTCTAAGCATGAAACATCTTGC
ATTCTTTTGTCAGATAAAATATATCTCATTACATATATGTATTTTATAGC
TATTCATGGTATTAAAGAAATGATTTGAAGAGAAGCGTTTATGAGGTATA
TTTTCACAATGGAAGACTATTGCATATGAAGAATAAGAATTGTTACACTG
AGAGAACATAGAAGTGACATTAGATCATTAGGGTAACTGAAATAAGGCAG
GTGCAGAAAGAAAAGTAATAGTACGATGATTGTATGTGACAATGTTGATC
TCCTGGAATTTGGCAGTATTACAGGGCTGCCAGAGGATGACAAGTGTTTC
TGCTGGGGAAGGCTAATTACTGGGTATGACATTCCAATTAG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCGAAAGAGGAAACATAAATGGCTGAGAAG
CACTTAAATGCTAAGCATCCTAAGTGATTAGGGAAACACAAATCAAAACA
ACACTGAGATTTCATCTTACCCTAGTCAGAATGGGCGAAATGAATAAAAC
ACATGATAGTTCATGCTCTCAGAGATGTGGAGAGTGGGGAATACTCTCTA
AGCTGATGGTAGTATGAATGTGGACAGACTATGGATGGACATCAGTATTG
TGGTTCATTGGGAAGCTGCAAATAGATTTACCTAAAGTTCCAGCCATACC
ATTTTTTGCTTTTTCCCCCACCCCACTCTACTTACTCACTGGTATTCTTG
TGCATTCATATTCATTGAAAATAACTTTAAGCATAACATCTAGTAATTGG
AAACTACTGTATGTCCATCAATGGATAAATGGATAATGAAAATATGGTAT
ATTTTATTATATAGTTAATATTACATATTAAAAATTATTCAGCTAGTAAA
ACACAAGATCAAAAAATGTACAGGTAAATGAATGAGAATAGAAAAAAAAG
TCATCCTGTGTCAGGTGTTTCACACATTGATAGGCATCCTATGATACAAA
ATCCACTAAGGTTAGGTACAGAATGAATGACAGGGATGGAGGTGAGGATC
TCCCTGGGAAGAAGAAATAAATAGATAGTTATGGAAAGACAGA

Query= MSMg01no274_k14.b1 MSMg01no274_k14.b1 CHROMAT_FILE:
MSMg01no274_k14.b1 PHD_FILE: MSMg01no274_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:14 2005
         (679 letters)



>mm_chr6_61996800_61997877
          Length = 1078

 Score = 1251 bits (647), Expect = 0.0
 Identities = 671/679 (98%), Gaps = 1/679 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttactcaacattttgtattttactttataaatattaagactcatggggttaagccggag 60
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 201 gttactcaacattttgtattttactttataaatattaagactcatgaggttaagtcggag 260

                                                                       
Query: 61  tatttttcggcaattttggatgaatagaggttaaaaggtatcctgtggaagggtcttttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttttcggcaattttggatgaatagaggttaaaaggtatcctgtggaagggtcttttc 320

                                                                       
Query: 121 aataatcagtggttagaagcttgaggaaactttggtacccaggaaatatttagtgacatg 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 aataatcagtggttagaagcttgaggaagctttggtacccaggaaatatttagtgacatg 380

                                                                       
Query: 181 tatgctttctgtagctgaaatgaatactctacaaacaaaaagttttaaacaaattaagga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgctttctgtagctgaaatgaatactctacaaacaaaaagttttaaacaaattaagga 440

                                                                       
Query: 241 tgatgttaaacatttttgtgatatctgcagtataatttatagaatcatttatctatttac 300
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 441 tgatgttaaacatttt-gtgatatctgcagtataatttatagaatcatttatctaaatac 499

                                                                       
Query: 301 tatagtttttaaaactgtgttctaagcatgaaacatcttgcattcttttgtcagataaaa 360
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtagtttttaaaactgtgttctaagcatgaaacatcttgcattcttttgtcagataaaa 559

                                                                       
Query: 361 tatatctcattacatatatgtattttatagctattcatggtattaaagaaatgatttgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatatctcattacatatatgtattttatagctattcatggtattaaagaaatgatttgaa 619

                                                                       
Query: 421 gagaagcgtttatgaggtatattttcacaatggaagactattgcatatgaagaataagaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gagaagcgtttatgaggtatattttcacaatggaagactattgcatatgaagaataagaa 679

                                                                       
Query: 481 ttgttacactgagagaacatagaagtgacattagatcattagggtaactgaaataaggca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttgttacactgagagaacatagaagtgacattagatcattagggtaactgaaataaggca 739

                                                                       
Query: 541 ggtgcagaaagaaaagtaatagtacgatgattgtatgtgacaatgttgatctcctggaat 600
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 740 ggtgcagaaagaaaagtaatagtacgatgattgtatgcgacaatgttgatctcctggaat 799

                                                                       
Query: 601 ttggcagtattacagggctgccagaggatgacaagtgtttctgctggggaaggctaatta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttggcagtattacagggctgccagaggatgacaagtgtttctgctggggaaggctaatta 859

                              
Query: 661 ctgggtatgacattccaat 679
           |||||||||||||||||||
Sbjct: 860 ctgggtatgacattccaat 878


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1078
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1068
Effective search space:   714492
Effective search space used:   714492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)