XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACAAA
GAAGTTCTCAATACCCATGTGCAAATATAAAAACTAATTTACAAGTGGAT
ACAATCTTTTAGAAAAGTAATAATAAATAAAGATAAACAATATATGTGTA
TTTTAGAAATTCTATATAAAAATGTTTGGAAGTTATATTTAATCTATGAG
GGATGTAGCTTGGTGGCAGAACTGTAGCAAGGATTGTGAAGGGGCCTTGT
TTCAATCATCAGCAACTGATACATCCACACCCCCAAAAAGGCACAAGCAA
ATACACACACACACTCACACACACACACACACACACACACACACACACAT
TTTTTTTTTTATGCCCCCCCGCCCCACACATGCATGCACACATAAGCACA
AGACACAAGAATAGGCACAATTAATGTTGGTGTCCCCAGCAAGCCAGGAA
ATAAGAAGATGGTGCTAGATTGGAACCAGGTCACTGGATATTTATGTGTC
CAATCTGAATTAGTGTTTCCAAACACTGGGTTTCCCTTACTCATCTTTTC
CATGTTATCAACATTACAGCTATATGTTAGCAGCACAGTTTCCCATGAGA
CAATGCCAGAAATTGTTAGAAAGTCAGTCTGTAACAGTATTTCCTAACAG
TCCTAATGCTTTGACCCTCTTTAATACAGTTCCTCATGTTGTGGTGACCC
TCAGTCATAAAATATTTTCCCTGCTACTTCATAACTAAAACGCATCTGTA
CAAAAA

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTGACATCATGAGCTGTCTATTCTG
CAAAATTCTGGTGATCTATGTCCCTCAGGAAAAATAATCAAGTGGACTTT
TGAGAAGAGGAGAAATACAATTGTAGAAAGCTTCCTTTCAGAGGCAGTCA
TGTTTATTTCCATCGTCATTGCCTTAATTCTCATGAAGAAAGAAATTCTG
CAAGGCCTACATGTGAGTTACTATTCTTTTTATAAATCTTTGCCTTAAAA
GGTACATGAATCAAGTTTGTGATCTCTATCCTGGAAGCAGATAACTATAA
AAAAAGACTTAAGTTACTTGCCCCCCGCCCATGAGCTCTTTTTCCAAAAC
CTGTTTTAAAAAGCCTAAGTATGACACATAAAACAATGAGAGAGCCAATA
CAGTTCCCTAGGAACCACTCTACTCAGAAGTGGATACAATCAGGGCTTTG
TGTCCAGCAGTGACCATGGATTCTGCTGCACAAATGTCCTCTCAGAGATG
TTGAATTGCCCTGGAAAGTCCAAGAAGAGCTTTGTGCCAGTGACTTCCCT
GAGCTGTCTTTGAAACTGACCTTATTAAATTTCTGCTGGGGTAATTTGCT
CAGGGGATCTGAGTTATTTGAATGGCTTGAAATAAGCTCCCTGTCTTTGA
CCTGAGTCTGGTTAGTAGAGCAAGGTTCATAAGAGGTTAGCAGGGCTTCT
GTTTCAGGTT

Query= MSMg01no277_d18.b1 MSMg01no277_d18.b1 CHROMAT_FILE:
MSMg01no277_d18.b1 PHD_FILE: MSMg01no277_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:20 2005
         (315 letters)



>mm_chr6_25218482_25219196
          Length = 715

 Score =  584 bits (302), Expect = e-171
 Identities = 308/310 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacaaagaagttctcaatacccatgtgcaaatataaaaactaatttacaagtgga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaattcacaaagaagttctcaatacccatgtgcaaatataaaaactaatttacaagtgga 408

                                                                       
Query: 65  tacaatcttttagaaaagtaataataaataaagataaacaatatatgtgtattttagaaa 124
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tgcaatcttttagaaaagtaataataaataaagataaacaatatatgtgtattttagaaa 348

                                                                       
Query: 125 ttctatataaaaatgtttggaagttatatttaatctatgagggatgtagcttggtggcag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttctatataaaaatgtttggaagttatatttaatctatgagggatgtagcttggtggcag 288

                                                                       
Query: 185 aactgtagcaaggattgtgaaggggccttgtttcaatcatcagcaactgatacatccaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aactgtagcaaggattgtgaaggggccttgtttcaatcatcagcaactgatacatccaca 228

                                                                       
Query: 245 cccccaaaaaggcacaagcaaatacacacacacactcacacacacacacacacacacaca 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 227 cccccaaaaaggcacaagcaaatacacacacacacacacacacacacacacacacacaca 168

                     
Query: 305 cacacacaca 314
           ||||||||||
Sbjct: 167 cacacacaca 158


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space:   216036
Effective search space used:   216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no277_d18.g1 MSMg01no277_d18.g1 CHROMAT_FILE:
MSMg01no277_d18.g1 PHD_FILE: MSMg01no277_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:20 2005
         (327 letters)



>mm_chr6_25037072_25037798
          Length = 727

 Score =  632 bits (327), Expect = 0.0
 Identities = 327/327 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   caatgagagagccaatacagttccctaggaaccactctactcagaagtggatacaatcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgagagagccaatacagttccctaggaaccactctactcagaagtggatacaatcag 260

                                                                       
Query: 61  ggctttgtgtccagcagtgaccatggattctgctgcacaaatgtcctctcagagatgttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctttgtgtccagcagtgaccatggattctgctgcacaaatgtcctctcagagatgttg 320

                                                                       
Query: 121 aattgccctggaaagtccaagaagagctttgtgccagtgacttccctgagctgtctttga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattgccctggaaagtccaagaagagctttgtgccagtgacttccctgagctgtctttga 380

                                                                       
Query: 181 aactgaccttattaaatttctgctggggtaatttgctcaggggatctgagttatttgaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactgaccttattaaatttctgctggggtaatttgctcaggggatctgagttatttgaat 440

                                                                       
Query: 241 ggcttgaaataagctccctgtctttgacctgagtctggttagtagagcaaggttcataag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcttgaaataagctccctgtctttgacctgagtctggttagtagagcaaggttcataag 500

                                      
Query: 301 aggttagcagggcttctgtttcaggtt 327
           |||||||||||||||||||||||||||
Sbjct: 501 aggttagcagggcttctgtttcaggtt 527


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space:   228324
Effective search space used:   228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)