Query= MSMg01no277_f17.b1 MSMg01no277_f17.b1 CHROMAT_FILE:
MSMg01no277_f17.b1 PHD_FILE: MSMg01no277_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:28 2005
(234 letters)
>mm_chr6_133999856_134000489
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Minus
Query: 1 cggttattatacatgaaggtgttataaaacatgccggagctttttgaagttcagttggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cggttattatacatgaaggtgttataaaacatgccggagctttttgaagttcagttggtt 352
Query: 61 cattccctgtcgctgaccaaacacctgttcgtttaagccagcttcttaaaaggcaggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cattccctgtcgctgaccaaacacctgttcgtttaagccagcttcttaaaaggcaggaca 292
Query: 121 ggattcagacacagtccagtttagaaggcaaatactaacacagaagcaaataacatttta 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggattcagacactgtccagtttagaaggcaaatactaacacagaagcaaataacatttta 232
Query: 181 aaattatcttctcaggctgttcaccactgagcatacacacacacacacacacac 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aaattatcttctcaggctgttcaccactgagcatacacacacacacacacacac 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_f17.g1 MSMg01no277_f17.g1 CHROMAT_FILE:
MSMg01no277_f17.g1 PHD_FILE: MSMg01no277_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:29 2005
(288 letters)
>mm_chr6_133825390_133826083
Length = 694
Score = 516 bits (267), Expect = e-151
Identities = 284/293 (96%), Gaps = 6/293 (2%)
Strand = Plus / Plus
Query: 1 cttggagctggagttacagactgtcctgaaccatcatatggttgctgccaattgaacctg 60
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 201 cttggagctggagttacagactgtcctgaaccatcatatgggtgctgggaattgaacctg 260
Query: 61 ggtcttctagctatctctccagcacctaaaaaagttgttttggttttgtttggttggttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcttctagctatctctccagcacctaaaaaagttgttttggttttgtttggttggttg 320
Query: 121 gtttg------acacttaggaatagtgaagtcttatagagagcagtttgtaagtgtattt 174
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttggttttgacacttaggaatagtgaagtcttatagagagcagtttgtaagtgtattt 380
Query: 175 aagatttttctttttagattataattacagcatttctttctttcttttagtgccaccaac 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagatttttctttttagattataattacagcatttctttctttcttttagtgccaccaac 440
Query: 235 cccaccacaacctattttcttcaaattcaggccctcttttttcactattattg 287
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccaccacaacctattttcttcaaattcaggccctcttttttcactattattg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 694
Length adjustment: 9
Effective length of query: 279
Effective length of database: 685
Effective search space: 191115
Effective search space used: 191115
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
