Query= MSMg01no290_i17.b1 MSMg01no290_i17.b1 CHROMAT_FILE:
MSMg01no290_i17.b1 PHD_FILE: MSMg01no290_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:08 2005
(276 letters)
>mm_chr6_102887061_102887736
Length = 676
Score = 511 bits (264), Expect = e-149
Identities = 273/276 (98%)
Strand = Plus / Minus
Query: 1 aaatatgtacataactgcacaaggtgtcaattctgctctacagtgcagtttagtcagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aaatatgtacataactgcacaaggtgtcaattctgctctacagtgcagtttagtcagttt 417
Query: 61 tagttgcataggtttccattgtatttatagtctgtttatgctaaatctggccaaagatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tagttgcataggtttccattgtatttatagtctgtttatgctaaatctggccaaagatga 357
Query: 121 gcattgtccaccactaaaatgcctatgccactgggaattctgggttaattttgtgaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gcattgtccaccactaaaatgcctatgccactgggaattctgggttaattttgtgaccag 297
Query: 181 aatgcagtgatcaaaatgttcaatctttttacagtggcataggaagatggcaaaaatttc 240
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 296 aatgcaatgatcaaaatattcaatctttttacagtggcataggaagatggcaaaattttc 237
Query: 241 ctaaagtgcaatagattttcaagtgtattgtgcctt 276
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ctaaagtgcaatagattttcaagtgtattgtgcctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no290_i17.g1 MSMg01no290_i17.g1 CHROMAT_FILE:
MSMg01no290_i17.g1 PHD_FILE: MSMg01no290_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:08 2005
(291 letters)
>mm_chrX_13038783_13039473
Length = 691
Score = 505 bits (261), Expect = e-147
Identities = 282/293 (96%), Gaps = 8/293 (2%)
Strand = Plus / Minus
Query: 1 acagccttagctctggactgcaggaggggacgctacttattctgctgcctctcagaatga 60
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 489 acagccttagctctggactgcagcaggggacgctacttattctgctgactctcagaatga 430
Query: 61 cgtcaccccaaggacaggcctagacaaagtcgggatgcaggctcgtaccggattccgggt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cgtcaccccaaggacaggcccagacaaagtcgggatgcaggctcgtaccggattccgggt 370
Query: 121 cctgcgcacaaagcgtgccttgg----cggtcgtagaggggcagagagctggccacgagt 176
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 369 cctgcgcacaaagcgtgccttggcggtcggtcgtagaggggc----agctggccacgagt 314
Query: 177 ccccagtatgaacgtttaagtccctattccttcccacctctctggatttcgaaaactagt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccccagtatgaacgtttaagtccctattccttcccacctctctggatttcgaaaactagt 254
Query: 237 tcagctcgctagcccgggttagcaaccactcgtgacgcaccaggggacttttt 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tcagctcgctagcccgggttagcaaccactcgtgacgcaccaggggacttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
