Query= MSMg01no291_g03.b1 MSMg01no291_g03.b1 CHROMAT_FILE:
MSMg01no291_g03.b1 PHD_FILE: MSMg01no291_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:09 2005
(233 letters)
>mm_chr6_22955896_22956527
Length = 632
Score = 412 bits (213), Expect = e-120
Identities = 228/233 (97%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 1 ctaaatgaatgaattcagttcttatccctatgccttcaactctagttacagaaggaagct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 ctaaatgaatgaattcagttcttatccctatgtcttcaactctagttacagaaggaagct 260
Query: 61 gttgtgttaaactacagttaactatgcagtaatactatcatgtccatttatacgaatttc 120
| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 g-tgtgttaaactacagttaactatgtagtaatactatcatgtccatttatacgaatttt 319
Query: 121 cccaaattttaaatagtatcacatattgaaattaaatttttgtgtttcctgtcagtaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cccaaattttaaatagtatcacatattgaaattaaatttttgtgtttcctgtcagtaaag 379
Query: 181 cacttggtataatacatgaattgtatcaaatgctggacatatgaagacattga 233
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacttggtataaaacatgaattgtatcaaatgctggacatatgaagacattga 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 632
Length adjustment: 9
Effective length of query: 224
Effective length of database: 623
Effective search space: 139552
Effective search space used: 139552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_g03.g1 MSMg01no291_g03.g1 CHROMAT_FILE:
MSMg01no291_g03.g1 PHD_FILE: MSMg01no291_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:09 2005
(230 letters)
>mm_chr6_50573282_50573911
Length = 630
Score = 420 bits (217), Expect = e-122
Identities = 226/229 (98%), Gaps = 2/229 (0%)
Strand = Plus / Minus
Query: 1 cttataaaattgccaagcttctgtaaggcaaaacacagtgtcaataagacaaaaaggcca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cttataaaattgccaagctcctgtaaggcaaaacacagtgtcaataagacaaaaaggcca 494
Query: 61 ccaacagattgggaaaggatttttaccaatcctaaaacttacaggggactaatatccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccaacagattgggaaaggatttttaccaatcctaaaacttacaggggactaatatccatt 434
Query: 121 ctg-gccaattctaaattccccagaaagacaactagaacaaccaccttcagcccccaagc 179
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctgag-caattctaaattccccagaaagacaactagaacaaccaccttcagcccccaagc 375
Query: 180 ccaggatctgggatgacaactcttgataacttcttcctgctgaatacgg 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ccaggatctgggatgacaactcttgataacttcttcctgctgaatacgg 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
