XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCATGCATTTTACTAGTAAAATCACATCCCGTTTTTACCCACAGAGCTTG
GCTATGGCAACCCTCTGGTGCCCTATTTGTCAGACTCATGATAAAATTCC
CCTCTTTTCCCATTGCCTCCATGTTCCTAATCTGACTGCCACGTTCTAGC
CAGACCGCTACATGGTCGGGTGAAAGTGAACTGTGAGGTGATATATTCTA
AAACTAAGAAGGACTTTAAAATCACAGCAAACCCTAAAGGTATCGTTAAA
ATGTATAGTAGATGCTGATGTCATTTAGATCCTAAAAGTTCCCCCAAAGG
CACACATATCTTCTTGACTTGACCCTACCCCCCGCGGGACTACTGACAGA
TACTGAAGCTTTTCAACGCCCCCCCACCTAAAGAAAGGAAAGTTAGCAGG
TGGGAGCATTCCCCCAGAATGACTGTAGGACCCTAGTCCCTTCCTCTTTG
AGTTTTAGCCGCTATAAAGCTACCACCCCCAGGAACTCTCACATTGCCTG
GGTCACAACAAGCTCCAAAGCGAGGGAGTACAAGCTGAGAGCCTCTGCAC
CTATTCTTTTGCAGAGTCCCTGTTTTAAAGCAGCACAGGTGTGTCCTCTT
ACCCGTAGGTCATACATCTGCAATGAGTGTCATAGCACCAACGTCTAGAA
ATTACCATACGCTGAGTCTACAGGCTCCATAAGAGGCTCCTAGTCCTTGT
TT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGGTGTGAGTGGCACAGCACACGTGTG
AAGGTCGAGGAAAACTTCTGGGAGTCGGTTCTCTCTTGCCACCACGTTCT
TAAGATGGAATTCATATCCCCAGGGTTGTGTGTTAAGCACCTTTATGCCC
CGAAACATTTCACCAACCCAGGAGTCTTCTCTAACTACACACTGAGGGTC
TAGATGGCTCTCATAACAACATTCACAGGTCTGTTTCCTTCCCACCTCAG
CACTTTCCCTTCTGAAACTGTCTTTATTCTGTGTGTTGCTTACTTGTGCC
CCTGTCTCTGTGATAACTTATCCTCCCCCCCCCAGAGGCCAGTGCACAAC
CAAGGAATTTTTCCCCCCCCCCAAAGAAGAAAAAGAACTGAGCCTCGGGG
ACAGCCTCGGTCACAGCCTCGGGCACAGCCTCGGGCACTGAGCCTCGGGC
ACAGCCTCGGGCACAGCCTCGGGTACAGTCTCGGGCACAGTCTCGGGTAC
CAGGCCCTTAAGTTCACACCTTCCCCATCTCTCCGCTGGCTTTCTCGGAC
CAAGCTCTGATTCCCACACACATGCACATGGTTTGTACAGCTTCTCTTCC
ATGGCTCAATGATGTTACTCAAAATGTTTTGATAGCTCTCTCTGTAACGC
TATTGGTATAACGCTGATGATTGGTCCCTTTTTCTTTATGTTAAAGTTTT

Query= MSMg01no295_j15.b1 MSMg01no295_j15.b1 CHROMAT_FILE:
MSMg01no295_j15.b1 PHD_FILE: MSMg01no295_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:34 2005
         (323 letters)



>mm_chr6_100641076_100641798
          Length = 723

 Score =  574 bits (297), Expect = e-168
 Identities = 312/317 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatgcattttactagtaaaatcacatcccgtttttacccacagagcttggctatg 64
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattcatgcattttaatagtaaaatcacatcccgtttttacccacagagcttggctacg 264

                                                                       
Query: 65  gcaaccctctggtgccctatttgtcagactcatgataaaattcccctcttttcccattgc 124
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcaaccctctggtggcctatttgtcagactcatgataaaattcccctcttttcccattgc 324

                                                                       
Query: 125 ctccatgttcctaatctgactgccacgttctagccagaccgctacatggtcgggtgaaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctccatgttcctaatctgactgccacgttctagccagaccgctacatggtcgggtgaaag 384

                                                                       
Query: 185 tgaactgtgaggtgatatattctaaaactaagaaggactttaaaatcacagcaaacccta 244
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgaactgtgaggtgatatgttctaaaactaagaaggactttaaaatcacagcaaacccta 444

                                                                       
Query: 245 aaggtatcgttaaaatgtatagtagatgctgatgtcatttagatcctaaaagttccccca 304
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 aaggtatcgttaaaatgtatagtagatgctgatgccatttagatcctaaaagttccccca 504

                            
Query: 305 aaggcacacatatcttc 321
           |||||||||||||||||
Sbjct: 505 aaggcacacatatcttc 521


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no295_j15.g1 MSMg01no295_j15.g1 CHROMAT_FILE:
MSMg01no295_j15.g1 PHD_FILE: MSMg01no295_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:35 2005
         (287 letters)



>mm_chr6_100826583_100827269
          Length = 687

 Score =  509 bits (263), Expect = e-148
 Identities = 281/287 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggtgtgagtggcacagcacacgtgtgaaggtcgaggaaaacttctgggagtcggttctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aggtgtgagtggcacagcacacgtgtgaaggtcgaggaaaacttctgggagtcggttctc 428

                                                                       
Query: 61  tcttgccaccacgttcttaagatggaattcatatccccagggttgtgtgttaagcacctt 120
           |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 427 tcttgccaccacgttcttaagatggagttcatatccccagggttgtgtgttaagtacctt 368

                                                                       
Query: 121 tatgccccgaaacatttcaccaacccaggagtcttctctaactacacactgagggtctag 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 367 tatgccccgaaacatttcaccaacccaggagtcttttctaactacacactgagggtctag 308

                                                                       
Query: 181 atggctctcataacaacattcacaggtctgtttccttcccacctcagcactttcccttct 240
           |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 307 atgggtctcataacaacattcacaggtctgtttccttcccacctcagcaccttcccttct 248

                                                          
Query: 241 gaaactgtctttattctgtgtgttgcttacttgtgcccctgtctctg 287
           |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 247 gaaactgtctttattctgtgtgctgcttacttgtgcccctgtctctg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space:   188484
Effective search space used:   188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)