Query= MSMg01no296_m09.b1 MSMg01no296_m09.b1 CHROMAT_FILE:
MSMg01no296_m09.b1 PHD_FILE: MSMg01no296_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:03 2005
(181 letters)
>mm_chr6_110023987_110024567
Length = 581
Score = 323 bits (167), Expect = 4e-93
Identities = 176/179 (98%)
Strand = Plus / Plus
Query: 1 atttgctcatttatttattttttgaaatgtgaacatttttacttaattttcataatttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgctcatttatttattttttgaaatgtgaacatttttacttaattttcataatttat 260
Query: 61 acttaaaatctaacaagtaagaagagatttttttaagatcttctttattttcttttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 acttaaaatctaacaagtaagaagagatttttttaagatcttctttattttctttattta 320
Query: 121 ttattattttatttagctacatttcagccattgcctgcaatcctagtcccccctcccag 179
|||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 ttattattttatttagttacatttcagccattgcctgcaatcccagtcccccctcccag 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_m09.g1 MSMg01no296_m09.g1 CHROMAT_FILE:
MSMg01no296_m09.g1 PHD_FILE: MSMg01no296_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:03 2005
(666 letters)
>mm_chr6_110023925_110024990
Length = 1066
Score = 1241 bits (642), Expect = 0.0
Identities = 661/668 (98%), Gaps = 2/668 (0%)
Strand = Plus / Plus
Query: 1 acataatctgaacctcttagataatgtttagggttttttt--gttttttgtttttgtttt 58
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 199 acataatctgaacctcttagataatgtttagggtttttttttgttttttgtttttgtttt 258
Query: 59 gcttatttgctcatttatttattttttgaaatgtgaacatttttacttaattttcataat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gcttatttgctcatttatttattttttgaaatgtgaacatttttacttaattttcataat 318
Query: 119 ttatacttaaaatctaacaagtaagaagagatttttttaagatcttctttattttctttc 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttatacttaaaatctaacaagtaagaagagatttttttaagatcttctttattttcttta 378
Query: 179 tttattattattttatttagttacatttcagccattgcctgcaatcctagtcccccctcc 238
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 379 tttattattattttatttagttacatttcagccattgcctgcaatcccagtcccccctcc 438
Query: 239 cagagttcctcatcccattcctgctctcccttacctccaggagggtgctttccccttccc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cagagttcctcatcccattcctgctctcccttacctccaggagggtgctttccccttccc 498
Query: 299 accaggtagcctctttccctgaggcctcaagtctttacaatatgagccacatcttctccc 358
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 499 accaggtagcctctttccctgaggcctcaagtctttacaatatgaggcacatcttctccc 558
Query: 359 actgaggccagagcaagcattcctccactacatatgtgcctggggccttggaccagccca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 actgaggccagagcaagcattcctccactacatatgtgcctggggccttggaccagccca 618
Query: 419 tggatacttgcctgactggtgattcagtctctggaagctcccagggatacaagtcagttg 478
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 619 tggatacttgcctgactggtgattcagtctctggaagttcccagggatacaagtcagttg 678
Query: 479 agactttttaagtaaatcttaacatctgtgtcgaagtataattgctgcaggaaggactgt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agactttttaagtaaatcttaacatctgtgtcgaagtataattgctgcaggaaggactgt 738
Query: 539 atgcatgcacctatttatgttggtgtatttttacatctgcctatacttgtgaggtcataa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atgcatgcacctatttatgttggtgtatttttacatctgcctatacttgtgaggtcataa 798
Query: 599 tcataagccagataacagagatctccaacatattctgaagtatccctgtatctttttgtg 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ccataagccagataacagagatctccaacatattctgaagtatccctgtatctttttgtg 858
Query: 659 cgtttctt 666
||||||||
Sbjct: 859 cgtttctt 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
