CTACCAGATTGCCGAGGGCGGCGGAATTCTGAAAGTTACGTGACGCATGC
ATCTGCTTCTATGTCCTGACCTCAGGTTACCTGAGATTTCTTAACCCCGT
TAAAGGAAGGAAGCCTGGGTATCTAGGAGACACTGCTGTGGGGCATGCAT
ACATCCTAGGCAAGCACAGCACAGCAGAGAAACTATAAACATTGGGGGAG
TGAGGGTCATTGGATTTAATGGTTCCTACCTTAAATCTGTAGGAGTATCC
TTGATCTTTATAACACAGCCTACTGTCTGCTCACTCCCTATAGAGTGAAG
TTCAGGATCATCAATGATTCACCTTCAACACTACTTCCCCTCACCCCCCA
TCAAATTAGTCAACAAGAGCTGCTGTTCACTTCTAGTCACCCATCTAGTT
CTTCATCCTGGTCCCATTGACTCCATGAGGTCCACCCGTACTAGGTCCCT
ACCTCTTCTCCCTCATGCATCTTCCCAGCTTGCCAGGGCACCAGGCTAAA
AGCCAAACTGCTTGATACCCATGCTTTTCCTTTCAATCTTGGCTCTGTAC
ACTTCGAAGGATAACGCCCATATTTTTTTTCCCATGCGTCAAGGAAGGAC
CTGTAAACACCTGATTTCCCGCTTTTTTTTTTTTTTGTTCTAATAACCCA
GTCCTCTCTGGATCTTGCTTCATACCAGCTCATTCTCCTAACCCCGCTGC
GCA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTGTTTCGAGAAATTCAGGACATTTCTCTTTCACAGAAAGGT
CCAGAGGCTCTTGGCTCTTGCTTGCTTGCAAAAGGTGGCTGGTGCATACA
GATGGCCATTTCCCTTGAATTGTCAGAAAGCATTACCTGGGCCAGCATGG
TCCTAGGAAGGCAGGAGGAGGAAGAGGAGGAGGAGGAAGAGTACCTTCTT
TCTCTTCTCACTCCCTTTGGACCTTTTTCCTCTTACCCTTGTCCTTTTTT
TATCCCTTTAATCATCACCCTTTTTTTATTTTTACTCCTCCATCCTTTAC
ATGTCATTTATCCTTCTACCTATCCCCACCTTTCTTCTATTATCCTTTTT
CTTCTCCTTTCGTTATCGTTAATCCCCCCTCTTACCTACATAAACTCCCC
TTCTGTAATTTTCTCCCCTTTCTATCATCCCATTTCCCTTCCTCCACCTC
TCCCACTCCTCCAACTTCCATTTCCCCAACATTTCCCTCCTTTCATCTCC
CTTCCCCCCCTTCTCTTTTCTTGCCCTCTCCCTTATTCCCAGCTTAGCTA
GCTCTTCCTTCCCTCCTTTATTTTTCTTCCTCCTTTTCCTCCATCTCCTC
TCTCTTCGTCACTTCCTTTCTTCTTCCTTTTTTCCCTTCTTCCTTCCCCC
ACCCCCCCCCTCTTTTTCTTACTCTCCCTTCTTCCTCCCGTTTTTTATAT
CCCGATTCCTCTTCTTTTTACCCACGAACCCTATGCCCGATTTCTATCTC
CGCCTCTATTACTATCCTAATAGCGTACCTTTAACACATATTAATACGCC
CTTATAA

Query= MSMg01no297_n03.b1 MSMg01no297_n03.b1 CHROMAT_FILE:
MSMg01no297_n03.b1 PHD_FILE: MSMg01no297_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:21 2005
         (195 letters)



>mm_chr6_31828595_31829189
          Length = 595

 Score =  348 bits (180), Expect = e-100
 Identities = 189/192 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gttaaaggaaggaagcctgggtatctaggagacactgctgtggggcatgcatacatccta 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 392 gttaaaggaaggaagcctgggtatctaggagacactgctgtgggacatgcatacatccta 333

                                                                       
Query: 61  ggcaagcacagcacagcagagaaactataaacattgggggagtgagggtcattggattta 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 332 ggcaagcacagcacagcagagaaactataaacattgtgggagtgagggtcattggattta 273

                                                                       
Query: 121 atggttcctaccttaaatctgtaggagtatccttgatctttataacacagcctactgtct 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atggttcctaccttaaacctgtaggagtatccttgatctttataacacagcctactgtct 213

                       
Query: 181 gctcactcccta 192
           ||||||||||||
Sbjct: 212 gctcactcccta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space:   109769
Effective search space used:   109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no297_n03.g1 MSMg01no297_n03.g1 CHROMAT_FILE:
MSMg01no297_n03.g1 PHD_FILE: MSMg01no297_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:21 2005
         (159 letters)



>mm_chr6_31643171_31643729
          Length = 559

 Score =  308 bits (159), Expect = 1e-88
 Identities = 159/159 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggacatttctctttcacagaaaggtccagaggctcttggctcttgcttgcttgcaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggacatttctctttcacagaaaggtccagaggctcttggctcttgcttgcttgcaaaa 260

                                                                       
Query: 61  ggtggctggtgcatacagatggccatttcccttgaattgtcagaaagcattacctgggcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtggctggtgcatacagatggccatttcccttgaattgtcagaaagcattacctgggcc 320

                                                  
Query: 121 agcatggtcctaggaaggcaggaggaggaagaggaggag 159
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcatggtcctaggaaggcaggaggaggaagaggaggag 359


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space:    83201
Effective search space used:    83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)