Query= MSMg01no301_p16.b1 MSMg01no301_p16.b1 CHROMAT_FILE:
MSMg01no301_p16.b1 PHD_FILE: MSMg01no301_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:30 2005
(658 letters)
>mm_chr6_18435950_18437006
Length = 1057
Score = 1166 bits (603), Expect = 0.0
Identities = 645/659 (97%), Gaps = 3/659 (0%)
Strand = Plus / Minus
Query: 1 tatgtttactcacacaaggagaaccccaagctggcttttccctct-gtaagtgtctgaac 59
||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 857 tatgtttactcacacaaggagaaccccaagcaggcttttccctctag-aagtgtctgaac 799
Query: 60 ccttggatgaaccctctgtgggattctgacttgtagacttgttctgcttgaggacagaaa 119
|||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 798 ccttggatgaaccctctgtggggttctgacttgtagacttgttctgc-tgaggacaaaaa 740
Query: 120 agatgaagaggtataaccagattcttgttttgtcttccattattatgtgataaataatgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agatgaagaggtataaccagattcttgttttgtcttccattattatgtgataaataatgc 680
Query: 180 acactaggacttcatgattttaaatagtgagccatttcctctgctttgaaatgtaagatt 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 acactaggacctcatgattttaaatagtgagccatttcctctgctttgaaatgtaagatt 620
Query: 240 ttggctagtttttgtgaggaccactcaccccctctaccttatatgtcaaagcacctattt 299
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttggctaggttgggtgaggaccactcaccccctctaccttatatgtcaaagcacctattt 560
Query: 300 tggatcatctgcattcaaaaaggctcccctatggtttttctgtctgttgggagctcagtg 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 559 tggatcatctgcattcaaaaaggctcccctctggtttttctgtctgttgggagttcagtg 500
Query: 360 aaggctacaagccagagagcatccttgtcacacagaatcaaggatccaacagggggcctc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaggctacaagccagagagcatccttgtcacacagaatcaaggatccaacagggggcctt 440
Query: 420 ctcagggacagagggtagattctgctcatttcttagaacctaggccacagccactgttgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctcagggacagagggtagattctgctcatttcttagaacctaggccacagccactgttgt 380
Query: 480 cacagtctactggtcaagcagtcacatcaacatccttgaaggtagatagggacctgacca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cacagtctactggtcaagcagtcacatcaacatccttgaaggtagatagggacctgacca 320
Query: 540 cacaggaatgccatggaacttgcggataattaatactttcaggaaactgcaaaccattat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cacaggaatgccatggaacttgcggataattaatactttcaggaaactgcaaaccattat 260
Query: 600 ctcctgagctctgcttagtactttatgcgaattagctcatctaatccccacaagtacct 658
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctcctgagctctgcttagtactatatgcgaattagctcatctaatccccacaagtacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1057
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1047
Effective search space: 678456
Effective search space used: 678456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_p16.g1 MSMg01no301_p16.g1 CHROMAT_FILE:
MSMg01no301_p16.g1 PHD_FILE: MSMg01no301_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:30 2005
(361 letters)
>mm_chr6_18364523_18365283
Length = 761
Score = 532 bits (275), Expect = e-155
Identities = 314/329 (95%), Gaps = 6/329 (1%)
Strand = Plus / Plus
Query: 1 gtgcttcatttcagtttggtgatgtaagtgaagactcttgtgttaagaaggaaaagttgt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 gtgcttcatttcagtttggtgatgtaagtgaagactcttgggttaagaaggaaaagttgt 260
Query: 61 cttatggagtgaa---aagaatgaggtatcttcaccagaccgtgttttcaacttggtaaa 117
|| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ctcatggagtgaaaagaagaatgaggtatcttcaccagaccgcattttcaacttggtaaa 320
Query: 118 acaaaatgaaagacttttgcttcagtcagctgtttttgctgtctcccgggaatggattaa 177
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 acaaagtgaaagacttttgcttcagtcagctgtttttgctgtctcccggtaatggattaa 380
Query: 178 tatttttataagaataatgagaccaccaagtaagctagaagcaagttaatagaaaccact 237
|||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 381 tatttttacaagaataatgagaccgccaagtaag--agaagcaagttaatagaaaccact 438
Query: 238 agaagccaacaaacgaggcatgtgcttcctaatattcactcccacccaaagacaggcaga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agaagccaacaaacgaggcatgtgcttcctaatattcactcccacccaaagacaggcaga 498
Query: 298 caaaaaaagtacacaagtgacaacacaca 326
||||||| ||| |||||||||||||||||
Sbjct: 499 caaaaaa-gtatacaagtgacaacacaca 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
