Query= MSMg01no302_h08.b1 MSMg01no302_h08.b1 CHROMAT_FILE:
MSMg01no302_h08.b1 PHD_FILE: MSMg01no302_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:06 2005
(347 letters)
>mm_chr6_50231990_50232736
Length = 747
Score = 625 bits (323), Expect = 0.0
Identities = 338/343 (98%)
Strand = Plus / Plus
Query: 5 gaattcagttctgtccatcgaggggggagcagctcataaccacctgtaactccaacttca 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gaattcagttctgggcatcgaggggggagcagctcataaccacctgtaactccaacttca 123
Query: 65 agggcccagtgttctcttctggactgttgttggcagaaacattaatacaaatacacataa 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 agggcccaatgttctcttctggactgttgttggcagaaacattaatacaaatacacataa 183
Query: 125 aagaaaaaatattaaataaaaaaaggaggcgaggaaatggcttgatcctgactggcgagg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 184 aagaaaaaatattaaataaaaaaaggaggcgaggaaatggcttgatcctgactggcgaag 243
Query: 185 gatctagcttgagagacttggattatccccaaccacaatcacctcacgtggagctgtgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gatctagcttgagagacttggattatccccaaccacaatcacctcacgtggagctgtgtg 303
Query: 245 gtggggtggtgacggttacagacaatcacctcacgtggagctgtgtggtggggtggtgac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtggggtggtgacggttacagacaatcacctcacgtggagctgtgtggtggggtggtgac 363
Query: 305 ggttacagacaatcacctcacgcggagctgtgtggtggggtgg 347
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 364 ggttacagacaatcacctcacgtggagctgtgtggtggggtgg 406
Score = 97.4 bits (50), Expect = 1e-24
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 219 acaatcacctcacgtggagctgtgtggtggggtggtgacggttacagaca 268
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 acaatcacctcacgtggagctgtgtggtggggtggtgacggttacagaca 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 2
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_h08.g1 MSMg01no302_h08.g1 CHROMAT_FILE:
MSMg01no302_h08.g1 PHD_FILE: MSMg01no302_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:06 2005
(284 letters)
>mm_chr6_50395456_50396138
Length = 683
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 attagttaccatggtgatatgtggctcaaagggaaagagtctggatctctaattgggacc 60
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 483 attagttaccatggtgatatgtggctcaaagggaaagagtctggat-tttaattgggacc 425
Query: 61 ctggggagcaaagttctattttcctgtgggtcacaattcaggctgcaaagatctgaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctggggagcaaagttctattttcctgtgggtcacaattcaggctgcaaagatctgaatga 365
Query: 121 ggaaaagaagagagactgactgggatcctcccaggagaaggagacgtgccaagtcctgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggaaaagaagagagactgactgggatcctcccaggagaaggagacgtgccaagtcctgtc 305
Query: 181 cttttgtacctttcaggttgtaggaggccacgtggacttggggagaagggtttgaatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cttttgtacctttcaggttgtaggaggccacgtggacttggggagaagggtttgaatttc 245
Query: 241 tttgatgttacacacagatttgtttatttactaattgggattga 284
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 244 tttgatgctacacacagatttgtttatttactaattgggattga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 683
Length adjustment: 9
Effective length of query: 275
Effective length of database: 674
Effective search space: 185350
Effective search space used: 185350
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
