Query= MSMg01no302_i10.b1 MSMg01no302_i10.b1 CHROMAT_FILE:
MSMg01no302_i10.b1 PHD_FILE: MSMg01no302_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:11 2005
(323 letters)
>mm_chr6_52497409_52498131
Length = 723
Score = 553 bits (286), Expect = e-162
Identities = 307/314 (97%)
Strand = Plus / Plus
Query: 5 gaattcagcatggctgacgcagagaggagcagaagaggccaaattatcaaggccttgtta 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcatggctgaagcagagaggagcagaagaggccaaattatcaaggccttgtta 264
Query: 65 gacaagctgcatagatccacattaacctacaagtaaccgtgagctattatgagaaggtat 124
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacaagctgcagagatagacattaacctacaagtaaccgtgagctattatgagaaggtac 324
Query: 125 caggagaagtgacacttgggtttacattgtagcctactctcattagcatgtgggaagcaa 184
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caggagaagtgactcttgagtttacattgtagcctactctcattagcatgtgggaagcaa 384
Query: 185 cccagagccatcaggatcagctggggaagtcttgtggtgtatggaaatgaggtgccacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccagagccatcaggatcagctggggaagtcttgtggtgtatggaaatgaggtgccacca 444
Query: 245 tggaattgctggagaaagaggaggcatctgaatgaatccaagacacacttgggaagtaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggaattgctggagaaagaggaggcatctgaatgaatccaagacacacttgggaagtaga 504
Query: 305 ggggacaaatgtca 318
||||||||||||||
Sbjct: 505 ggggacaaatgtca 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_i10.g1 MSMg01no302_i10.g1 CHROMAT_FILE:
MSMg01no302_i10.g1 PHD_FILE: MSMg01no302_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:11 2005
(295 letters)
>mm_chr6_52657833_52658529
Length = 697
Score = 549 bits (284), Expect = e-161
Identities = 293/296 (98%), Gaps = 2/296 (0%)
Strand = Plus / Minus
Query: 1 aacaaaaaccttagatttgcagcaactcactttaaaaataaattattcatttatttttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aacaaaaaccttagatttgcagcaactcactttaaaaataaattattcatttatttttat 619
Query: 61 tttataggtatgcataatttctgtgcctggtattcagggaggccaaaagaaggcgttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tttataggtatgcataatttctgtgcctggtattcagggaggccaaaagaaggcgttgga 559
Query: 121 tcctcacaaactagagtttcagacaattgtgagcccccatgtgggttctgggaatccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 558 tcctcacaaactagagtttcagacaattgtgagcccccatgtgggttctaggaatccaac 499
Query: 181 ccatccctaattcacttcctttaaaaaacaaacaaacaacaacaacaa-aa-aaaaactg 238
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 498 ccatccctaattcacttcctttaaaaaacaaacaaacaacaacaacaacaacaaaaactg 439
Query: 239 ttgaagggcctaaaaaacaatgggagaaggggaaaaactagtgataggctgctgcc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttgaagggcctaaaaaacaatgggagaaggggaaaaactagtgataggctgctgcc 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 697
Length adjustment: 9
Effective length of query: 286
Effective length of database: 688
Effective search space: 196768
Effective search space used: 196768
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
