Query= MSMg01no303_b22.b1 MSMg01no303_b22.b1 CHROMAT_FILE:
MSMg01no303_b22.b1 PHD_FILE: MSMg01no303_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:56 2005
(666 letters)
>mm_chr6_119909814_119910879
Length = 1066
Score = 1139 bits (589), Expect = 0.0
Identities = 605/611 (99%), Gaps = 2/611 (0%)
Strand = Plus / Minus
Query: 5 gaattcaattcccagtcaccacatggtgactgataaccatctataatgaaatatgatgcc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gaattcaattcccagccaccacatggtgactgataaccatctataatgaaatatgatgcc 550
Query: 65 attgtttgttttgggggcacacatgcaggcagagcactatacataataagtatataataa 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 attgtttgtttggggggcacacatgcaggcagagcactatacataataagtatataataa 490
Query: 125 atctttttttaaaaaaagaaagaaaagaattgctatatttataatttatcgcccatccta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atctttttttaaaaaaagaaagaaaagaattgctatatttataatttatcgcccatccta 430
Query: 185 aataattttatgcataaggttaaaccatacaaagaaaatctttgtttctactttataact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aataattttatgcataaggttaaaccatacaaagaaaatctttgtttctactttataact 370
Query: 245 tgtccatgtaagagcatttatcacctttaatcctagcatttgggaagcaggggcaggtga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgtccatgtaagagcatttatcacctttaatcctagcatttgggaagcaggggcaggtga 310
Query: 305 atctctgggttgaaggtctatacatggtccacagagcacagccatgcctattgaaaaaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atctctgggttgaaggtctatacatggtccacagagcacagccatgcctattgaaaaaat 250
Query: 365 ccttatctttaaaaaaaaaatgagcatttttgtcattttggtctgaatgaaaataatctt 424
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccttatcttt--aaaaaaaatgagcatttttgtcattttggtctgaatgaaaataatctt 192
Query: 425 aaaggaattggagaggtggctccctagataagagcatgtactattattcttccaaaggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaaggaattggagaggtggctccctagataagagcatgtactattattcttccaaaggaa 132
Query: 485 gacctaggttcacttcccaggacccacatggtggctaacaaacatctgcaactaattcca 544
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 131 gacctaggttcacttcccaggacccacatggtggctaacaaacatctgtaactaattcca 72
Query: 545 tgggatccagtgctctcttatggcctcctcaaaattaatgttaaacacacatatacatgc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgggatccagtgctctcttatggcctcctcaaaattaatgttaaacacacatatacatgc 12
Query: 605 aggcacaacat 615
||||| |||||
Sbjct: 11 aggcataacat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_b22.g1 MSMg01no303_b22.g1 CHROMAT_FILE:
MSMg01no303_b22.g1 PHD_FILE: MSMg01no303_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:56 2005
(680 letters)
>mm_chr6_119726929_119728011
Length = 1083
Score = 1251 bits (647), Expect = 0.0
Identities = 673/685 (98%), Gaps = 7/685 (1%)
Strand = Plus / Plus
Query: 1 cagtctacttcactccttaagagcactttttccattcatctctgacactttgaggaaggt 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 cagtctacttcactccttaagagcactttttccattcatct--gacactttgaggaaggt 258
Query: 61 acgcttggacaatacagactagatagtgaagaaattacaagaaaaactctagaatcagat 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acgcatggacaatacagactagatagtgaagaaattacaagaaaaactctagaatcagat 318
Query: 121 tgctggtgtcaatcagaccccacc-----tctctctggtggcttcctggacatcatctgt 175
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 319 tgctggtgtcaatcagaccccaccccacctctctctggtggcttcctggacatcatttgt 378
Query: 176 aaattagtgtagatcactctaccaggttataagatgcttttagtaagtatctaagtggaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaattagtgtagatcactctaccaggttataagatgcttttagtaagtatctaagtggaa 438
Query: 236 attatattattattacttatcaaaatgcttagaaatacagttttaagttcactacacaga 295
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 439 attatattattattacttatcaaaatgcttagaaatacagctttaagttcactacacaga 498
Query: 296 aagctaaagcagatttagtaatttaaaataagttatcacactagttctaatctatgagct 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagctaaagcagatttagtaatttaaaataagttatcacactagttctaatctatgagct 558
Query: 356 aacttaaataggctaattactctctatacagctatcttaaagaaaatgccatttgttaca 415
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 559 aacttaaataggctaattactctctatacagctatgttaaagaaaatgccatttgttaca 618
Query: 416 aagtctcctaatgaaaacttatattgtctccatgtagaactaaagcagtttctcaagaat 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aagtctcctaatgaaaacttatattgtctccatgtagaactaaagcagtttctcaagaat 678
Query: 476 ttcaaatgcaggaaagttgtaggtgctgagcctagagacatttacacattcctgtaccta 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttcaaatgcaggaaagttgtaggtgctgagcctagagacatttacacattcctgtaccta 738
Query: 536 aaaagaatggagggaaaacattcatataaatcaatgtatatctagtcaacaagaggatga 595
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aaaagaatggaaggaaaacattcatataaatcaatgtatatctagtcaacaagaggatga 798
Query: 596 ggaaggagagtttatagacaccatccatagagtggcaaaacaatacagacccagtgtgta 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ggaaggagagtttatagacaccatccatagagtggcaaaacaatacagacccagtgtgta 858
Query: 656 aggcttccagaatacatacagtctc 680
|||||||||||||||||||||||||
Sbjct: 859 aggcttccagaatacatacagtctc 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1083
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1073
Effective search space: 718910
Effective search space used: 718910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
