TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCACCTGAGTGATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCA
ACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTAAGATTCCA
CCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAGAT
GCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAT
TGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCCTCAGAAA
ATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATAT
ATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTC
ATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCC
CTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGT
ACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGG
ATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAA
CTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTAGG
ATACCCAAGATATAAGATATAATTTCCTAAACACATGAAACTCAAGAAAA
ATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGAACAAA
ACACCCTT

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATTCCCTCTCAACTGAGTTAGTTTGGAGAGG
AAGCTCTGTTGGCTACTCTGTGTCAATGGACAAGGTTAAGGAATGTGTAT
TAGAAGGTTGCTTTCTGAGAAACAGATAGAAAAAAAAAACGAGGCTTACA
CATTCATTCAAAGGCTAGGGCTGGGCCACTGTAAAGCTCACTAACAACAA
AGCCTTAGTGAGGCTGTAAACCTTGACATAGTCATCAGAGGAAAAAGATG
AAAGGGGTTGCAAGCTAATTTTAAGGGATATGCTTCCATAACTTCTTCCT
CATGCCCACTTACTGTCTTTCTCCTGTCAAGAATGCTACCGAATATCCAT
GCAGCAAACTCCCACTGTGTACTAACTTTAAGACAGCAGGACCAAATGCT
AAAGAAATATTAACATACACGAAGGATACAAACTGTTTTTAGTCTGTGAC
TGAGGTCACCTCCAGAATATACCATCTGGAATCCAGACCCTTTTTATGCC
TCAGACTTTTAAAATTACTTTCAGAGTTTATACATAAAATGTCTTCTGGT
TTGATTGACTAATTAGCCCAGCTGATCATTACTTCTTTAGATGAAAAGAG
GTCCTTTTGTGATCAAGTCAGGATTGCAGCCCCGTATCTGTCAATATGAG
CAAAGATTCTGCGTCTTTCCTGTTAACTCTGTTAGATGCTCACGTTTATA
N

Query= MSMg01no303_d20.g1 MSMg01no303_d20.g1 CHROMAT_FILE:
MSMg01no303_d20.g1 PHD_FILE: MSMg01no303_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:06 2005
         (680 letters)



>mm_chr6_111394997_111396076
          Length = 1080

 Score = 1315 bits (680), Expect = 0.0
 Identities = 680/680 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   attccctctcaactgagttagtttggagaggaagctctgttggctactctgtgtcaatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 attccctctcaactgagttagtttggagaggaagctctgttggctactctgtgtcaatgg 821

                                                                       
Query: 61  acaaggttaaggaatgtgtattagaaggttgctttctgagaaacagatagaaaaaaaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 acaaggttaaggaatgtgtattagaaggttgctttctgagaaacagatagaaaaaaaaaa 761

                                                                       
Query: 121 cgaggcttacacattcattcaaaggctagggctgggccactgtaaagctcactaacaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 cgaggcttacacattcattcaaaggctagggctgggccactgtaaagctcactaacaaca 701

                                                                       
Query: 181 aagccttagtgaggctgtaaaccttgacatagtcatcagaggaaaaagatgaaaggggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aagccttagtgaggctgtaaaccttgacatagtcatcagaggaaaaagatgaaaggggtt 641

                                                                       
Query: 241 gcaagctaattttaagggatatgcttccataacttcttcctcatgcccacttactgtctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gcaagctaattttaagggatatgcttccataacttcttcctcatgcccacttactgtctt 581

                                                                       
Query: 301 tctcctgtcaagaatgctaccgaatatccatgcagcaaactcccactgtgtactaacttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tctcctgtcaagaatgctaccgaatatccatgcagcaaactcccactgtgtactaacttt 521

                                                                       
Query: 361 aagacagcaggaccaaatgctaaagaaatattaacatacacgaaggatacaaactgtttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aagacagcaggaccaaatgctaaagaaatattaacatacacgaaggatacaaactgtttt 461

                                                                       
Query: 421 tagtctgtgactgaggtcacctccagaatataccatctggaatccagaccctttttatgc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tagtctgtgactgaggtcacctccagaatataccatctggaatccagaccctttttatgc 401

                                                                       
Query: 481 ctcagacttttaaaattactttcagagtttatacataaaatgtcttctggtttgattgac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctcagacttttaaaattactttcagagtttatacataaaatgtcttctggtttgattgac 341

                                                                       
Query: 541 taattagcccagctgatcattacttctttagatgaaaagaggtccttttgtgatcaagtc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 taattagcccagctgatcattacttctttagatgaaaagaggtccttttgtgatcaagtc 281

                                                                       
Query: 601 aggattgcagccccgtatctgtcaatatgagcaaagattctgcgtctttcctgttaactc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aggattgcagccccgtatctgtcaatatgagcaaagattctgcgtctttcctgttaactc 221

                               
Query: 661 tgttagatgctcacgtttat 680
           ||||||||||||||||||||
Sbjct: 220 tgttagatgctcacgtttat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)