Query= MSMg01no311_d02.b1 MSMg01no311_d02.b1 CHROMAT_FILE:
MSMg01no311_d02.b1 PHD_FILE: MSMg01no311_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:58 2005
(320 letters)
>mm_chr6_96579542_96580259
Length = 718
Score = 526 bits (272), Expect = e-154
Identities = 300/310 (96%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 4 ggaattctacgtccatctcctaacatcatgccagtgattaggagccaatagaaactcttc 63
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggaattctaagtccatctcctaacatcatgccagtgattaggagccaatagaaactcttc 452
Query: 64 agaggatcactctgacctcagtgctaatcttctaggtgtcatataccatttgctttagat 123
||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 451 agaggatcactcttacctcagtgctactcttctaggtgtcatacaccatttgctttagat 392
Query: 124 caagatgacgagcatccagtttctgcagacacaccaggatatattatttagcagtaggaa 183
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 391 ccagatgacgagcatccagtttctgcggacacaccaggatatattatttagcagtaggaa 332
Query: 184 aaaaaattttgttatctaaagtggaatttagttttatcactgatgtcaactgcaaaacta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aaaaaattttgttatctaaagtggaatttagttttatcactgatgtcaactgcaaaacta 272
Query: 244 gttgccacgtgaaagctcaagagctttgacgacaaatgaatgtgaatcagagaccagctt 303
||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 271 gttgccacgtgaaagctcaagagctttgaagacaaatgaatgtgaatcaga--ccagctt 214
Query: 304 tgcggtcaga 313
|| |||||||
Sbjct: 213 tgtggtcaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_d02.g1 MSMg01no311_d02.g1 CHROMAT_FILE:
MSMg01no311_d02.g1 PHD_FILE: MSMg01no311_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:58 2005
(283 letters)
>mm_chr6_96410136_96410818
Length = 683
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%)
Strand = Plus / Plus
Query: 1 acagaacaaatgctacctcttgccaacagtggcctccttaagtctcagtagaatgtgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagaacaaatgctacctcttgccaacagtggcctccttaagtctcagtagaatgtgagg 260
Query: 61 tccaagccaatttggatacaaacaaaagtaggtgctagaaaatgcagtatttgctacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaagccaatttggatacaaacaaaagtaggtgctagaaaatgcagtatttgctacttc 320
Query: 121 cattaacaataaaaatgttcctccagttagcttttgttccactttgccatctgactctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattaacaataaaaatgttcctccagttagcttttgttccactttgccatctgactctat 380
Query: 181 tcagagtggatgagagcttcagtagaggatctttaatcagcccacaatggctgtgaactt 240
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagagtggatgagagcttcagtaaaggatctttaatcagcccacaatggctgtgaactt 440
Query: 241 gcgtatcttgtatgggtgccagaaaatgagctagttaaattta 283
| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttatcttgtatgggtgccagaaaatgagctagttaaattta 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
