Query= MSMg01no312_e12.b1 MSMg01no312_e12.b1 CHROMAT_FILE:
MSMg01no312_e12.b1 PHD_FILE: MSMg01no312_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:19 2005
(695 letters)
>mm_chr3_99106161_99107255
Length = 1095
Score = 1270 bits (657), Expect = 0.0
Identities = 678/691 (98%), Gaps = 11/691 (1%)
Strand = Plus / Plus
Query: 5 gaattcaacttgactcacaggatccataggcaggaagtgaaagaaaactgtcatgtgtat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacttgactcacaggatccataggcaggaagtgaaagaaaactgtcatgtgtat 264
Query: 65 gtaaaatcaaggtagagaacatagagaatgaaggtggaaatctacgttctgacagccatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaaaatcaaggtagagaacatagagaatgaaggtggaaatctacgttctgacagccatg 324
Query: 125 ctagttacaagttctgagctctacatggctgcataattttgctcacctcatcttgagagt 184
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 ctagttacaagttctgagctctacatggctgc----------tcacctcatcttgagagt 374
Query: 185 ctagaagtatgagcacatagtacatgttcagtaaacagtggttagttcaggtgagcccga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctagaagtatgagcacatagtacatgttcagtaaacagtggttagttcaggtgagcccga 434
Query: 245 gtctcaacctccatccctcacactactcactatccacccttacacactctaaagtctgac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtctcaacctccatccctcacactactcactatccacccttacacactctaaagtctgac 494
Query: 305 cataccagtttacttctggtgttctaagatcacccaaatccttattcttgctatttatac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cataccagtttacttctggtgttctaagatcacccaaatccttattcttgctatttatac 554
Query: 365 tacataaaaaaaatcagcctcatcttctgtttgatgctattgaacctatattttgagtgt 424
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 555 tacataaaaaaa-tcagcctcatcttctgtttgatgctattaaacctatattttgagtgt 613
Query: 425 gtaccactcaaatgtcattttatgaagtcttttgatattgattagttttgtctttggttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtaccactcaaatgtcattttatgaagtcttttgatattgattagttttgtctttggttc 673
Query: 485 acaattccctaacactctccttgtgtttgttagagcatccagcacagtaagactttaaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 acaattccctaacactctccttgtgtttgttagagcatccagcacagtaagactttaaca 733
Query: 545 ctttctatatccttcctaccagattctcagtggcctgagatcagaaacatgatttatcta 604
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 734 ctttctatatccttcctaccagattctcagtgacctgagatcagaaacatgatttatcta 793
Query: 605 tctttgcccattaacataaaatctggtctatatgaagcagagtatcaaggactgagttac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tctttgcccattaacataaaatctggtctatatgaagcagagtatcaaggactgagttac 853
Query: 665 tatcaacagaatcaataagttgttttatcat 695
|||||||||||||||||||||||||||||||
Sbjct: 854 tatcaacagaatcaataagttgttttatcat 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_e12.g1 MSMg01no312_e12.g1 CHROMAT_FILE:
MSMg01no312_e12.g1 PHD_FILE: MSMg01no312_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:19 2005
(285 letters)
>mm_chr6_147965337_147966021
Length = 685
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%)
Strand = Plus / Plus
Query: 1 tttgtgtgtaggaggaagtgaagtccgtttgtggaaccaatgaaatagcccaacaagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtgtgtaggaggaagtgaagtccgtttgtggaaccaatgaaatagcccaacaagtaa 260
Query: 61 aggcaattgccaccaaggatgacagcatacgtttgagtctcctcagaaccaatatgtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcaattgccaccaaggatgacagcatacgtttgagtctcctcagaaccaatatgtggg 320
Query: 121 agtatagaactgactcctactagttgtcctctgatctctgcatatatcccatggcaccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtatagaactgactcctactagttgtcctctgatctctgcatatatcccatggcaccca 380
Query: 181 ggtccatgcatctgtacatgtcagcacctcaaggcactgcctgggtgggtgcctctacaa 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ggtccatgcatctgtacatgtcagcacctcaaggtactgcctgggtgggtgcctctacaa 440
Query: 241 taagtggtgatgtggtagacagagtagaaagagaaggggagag 283
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 taagtggtgatgtggtagagagagtagaaagagaaggggagag 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
