Query= MSMg01no315_b04.b1 MSMg01no315_b04.b1 CHROMAT_FILE:
MSMg01no315_b04.b1 PHD_FILE: MSMg01no315_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:26 2005
(680 letters)
>mm_chr6_7698810_7699889
Length = 1080
Score = 1247 bits (645), Expect = 0.0
Identities = 669/677 (98%)
Strand = Plus / Plus
Query: 4 gaattcaagcaggtctcagtaggaatcctattataaaatttcctagaccagaaagtcttt 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaagcaggcctaagtaggaatcctattataaaatttcctagaccagaaagtcttt 263
Query: 64 catttggaagatttatcaggaataaggcccaactcagagagcaaagaacacttccctttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catttggaagatttatcaggaataaggcccaactcagagagcaaagaacacttccctttg 323
Query: 124 caatctagatggagacctggggtatctggggatagtcctggccatgagaaaaacctgttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caatctagatggagacctggggtatctggggatagtcctggccatgagaaaaacctgttg 383
Query: 184 gccttctctagggaaagctgggcacagctgtcaagcaaaagtcagctactagattcttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccttctctagggaaagctgggcacagctgtcaagcaaaagtcagctactagattcttct 443
Query: 244 tacttctgtgatgtgccaccactattcctgcatgccttcaaatgcagcttacagagatct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacttctgtgatgtgccaccactattcctgcatgccttcaaatgcagcttacagagatct 503
Query: 304 gtggtgacaccctatctgtaatgtgtcccatccctgaagcacctgatgaattctgcttcg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtggtgacaccctatctgtaatgtgtcccatccctgaagcacctgatgaattctgcttcg 563
Query: 364 aggcaaataaaggacttgtgatatttgtattttattttagtgtgtctgggatatggtgcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aggcaaataaaggacttgtgatatttgtattttattttagtgtgtctgggatatggtgcc 623
Query: 424 agtcaactgttagtcaaagactagatgctatttgtgaaggtaatttttagatgtagttga 483
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 624 agtcaactgttagtcaaagactagatcctatttgtgaagataatttttagatgtagttga 683
Query: 484 cagtgagaactcgttggctttaagcaaagcagattgtccttaatgtgtgtaaacctcaca 543
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagtgacaactcgttggctttaagcaaagcagattgtccttaatgtgtgtaaacctcaca 743
Query: 544 gagccatctgtgtgcctggagagtaaaaggggtataggaggaggaaaatataactaagag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gagccatctgtgtgcctggagagtaaaaggggtataggaggaggaaaatataactaagag 803
Query: 604 ctcagatttagcgaagtcttatgccacattccacctagttgaattcaccctgagcgattt 663
|||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 804 ctcagatttagcaaagtcttatgccacattccacctagttgaattcaccctgacctattt 863
Query: 664 cctagccacccgttccc 680
|||||||||||||||||
Sbjct: 864 cctagccacccgttccc 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_b04.g1 MSMg01no315_b04.g1 CHROMAT_FILE:
MSMg01no315_b04.g1 PHD_FILE: MSMg01no315_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:27 2005
(251 letters)
>mm_chr6_7750481_7751131
Length = 651
Score = 447 bits (231), Expect = e-130
Identities = 247/255 (96%), Gaps = 5/255 (1%)
Strand = Plus / Minus
Query: 1 catttactctatttaccaaaggtatgatgtgtcatttagtaaattttatcatttaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 345 catttactctatttaccaaaggtatgatgtgtcatttagtaaattttattatttaaatat 286
Query: 61 ctttttaactaagcaaactttctcgtgctgtttttgtggtaattggtaatataaatttgg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctttttaactaagcaaactttcttgtgctgtttttgtggtaattggtaatataaatttgg 226
Query: 121 ggcttggttgttg-----ttgttttgtttttttggtttctttgttttgctttttagacag 175
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ggcttggttgttgttgttttgttttgtttttttggtttctttgttttgctttttagacag 166
Query: 176 ggtctcgctattctgcccaggttatcctagaacttgttatgtagatcatgtttcttgagc 235
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 165 ggtctcgctattctgcccaggttatcctagaacttgttatgtagatcaggtttcttgagc 106
Query: 236 tcagaagaaatccac 250
|||||||||||||||
Sbjct: 105 tcagaagaaatccac 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
