Query= MSMg01no315_d08.b1 MSMg01no315_d08.b1 CHROMAT_FILE:
MSMg01no315_d08.b1 PHD_FILE: MSMg01no315_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:36 2005
(353 letters)
>mm_chr6_106043408_106044160
Length = 753
Score = 650 bits (336), Expect = 0.0
Identities = 348/352 (98%), Gaps = 2/352 (0%)
Strand = Plus / Minus
Query: 1 ttcctcttgatgtacattgtcaagcatgcttgcctgctatattttgagctgaaatatacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttcctcttgatgtacattgtcaagcatgcttgcctgctatattttgagctgaaatatacc 492
Query: 61 gaggtctgaaactaatacatacaagcagaaatcaaagttagattacattctattagagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gaggtctgaaactaatacatacaagcagaaatcaaagttagattacattctattagagtc 432
Query: 121 aggtgactagacat-aaaaacatttctacaaaacctatttgccattagttacttttggaa 179
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 431 aggtgactagacataaaaaacatttctacaaaccctatttgccattagttacttttggaa 372
Query: 180 gggctatcaaaagcaacttcatcttgttgggttgatgcttccttgtgccattatgctttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gggctatcaaaagcaacttcatcttgttgggttgatgcttccttgtgccattatgctttg 312
Query: 240 gcaggcctcaaacttggtagacctcctgctcacccttcccaagtgaccagaatacaggca 299
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 311 gcaggcctcaaacttgg-agacctcctggtcacccttcccaagtgaccagaatacaggca 253
Query: 300 agacattaccagatctagcatgaattcattttaattctgacaacttcccata 351
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agacattaccagatctagcatgaattcattttaattctgacaacttcccata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_d08.g1 MSMg01no315_d08.g1 CHROMAT_FILE:
MSMg01no315_d08.g1 PHD_FILE: MSMg01no315_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:37 2005
(244 letters)
>mm_chr6_105875316_105875959
Length = 644
Score = 433 bits (224), Expect = e-126
Identities = 239/244 (97%)
Strand = Plus / Plus
Query: 1 aattcttagcacaccttctttgttcctgtggtgaaacaaacatcttgttgccccgcctga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 201 aattcttagcacaccttctttgttcctgtggtgaaacaaacatcttggtgcagtgcctga 260
Query: 61 atgaaccatttagttgtccctatcatgtgcccatcagctatatgcaatctcattttagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaaccatttagttgtccctatcatgtgcccatcagctatatgcaatctcattttagtc 320
Query: 121 ttgtgttcacagagctttgtttgaatttgtgctccaatatttgagtagatagcctcagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgttcacagagctttgtttgaatttgtgctccaatatttgagtagatagcctcagtc 380
Query: 181 tctgacacctattttcctatcttaaaaaaaagagagagatggtagtattggtcataggct 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgacacctatttttctatcttaaaaaaaagagagagatggtagtattggtcataggct 440
Query: 241 tctg 244
||||
Sbjct: 441 tctg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
