Query= MSMg01no315_o21.b1 MSMg01no315_o21.b1 CHROMAT_FILE:
MSMg01no315_o21.b1 PHD_FILE: MSMg01no315_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:33 2005
(370 letters)
>mm_chr6_112869821_112870590
Length = 770
Score = 654 bits (338), Expect = 0.0
Identities = 362/370 (97%), Gaps = 2/370 (0%)
Strand = Plus / Minus
Query: 3 ggaattcttctattgctcccatgtttatagactagtgggaaataaagcaaacacttagga 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggaattcttctattgcttccatgtttatagactagtgggaaataaagcaaacacttagga 344
Query: 63 gtaaggacactggtgggtgttctagattgcttcatcagacagcagagacgatggtaatgg 122
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 343 gtaaggacactggtgggtgttctagattgcttcatcagacagcagagatgatggtaatgg 284
Query: 123 aggtgaggaactaatttctgaagacattgaatgtactcaagaggttgtgttgaggaacat 182
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 283 aggtgaggaactaatttctgaagacattgagtgtactcaagaggttgtgttgaggaacat 224
Query: 183 catttaaaaacacttttatggtttttttattggctatttcctttatttacatttcaaatg 242
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cattttaaaacacttttatggtttttttattggctatttcctttatttacatttcaaatg 164
Query: 243 ttatcccctttgccggttt-ccccctcccagaatcaccctatcccattcccccca-cccc 300
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 163 ttatcccctttgccggtttcccccctcccagaaacaccctatcccattccccccatcccc 104
Query: 301 catgcttctatgacggtgttccccaactcacccacccactcccacctccctgccctcgat 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 103 catgcttctatgacggtgttcccccactcacccacccactcccacctccctgccctcgat 44
Query: 361 tcccctacac 370
||||||||||
Sbjct: 43 tcccctacac 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_o21.g1 MSMg01no315_o21.g1 CHROMAT_FILE:
MSMg01no315_o21.g1 PHD_FILE: MSMg01no315_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:33 2005
(340 letters)
>mm_chr6_112695631_112696370
Length = 740
Score = 650 bits (336), Expect = 0.0
Identities = 339/340 (99%)
Strand = Plus / Plus
Query: 1 agtttgggctgcctgcaccccatgtcttctccttgtccctggactgagaatgtgagatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttgggctgcctgcaccccatgtcttctccttgtccctggactgagaatgtgagatgg 260
Query: 61 acagcagtgggcttggctctacaactagggatcacactatccgaatgctttttcctggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagcagtgggcttggctctacaactagggatcacactatccgaatgctttttcctggat 320
Query: 121 ttccagttcatagttctactatggcaggaagctaagtactgtgtggcaaaggcagacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccagttcatagttctactatggcaggaagctaagtactgtgtggcaaaggcagacatt 380
Query: 181 gagaagtgagcttcatatgacacagttggttcttcctttgccgggtcctcctatgcttac 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 gagaagtgagcttcatatgacacagttggttcttcctttgctgggtcctcctatgcttac 440
Query: 241 aaagcttctgagaccactgcaagcataggagctttgcacatacattcatacatacataca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagcttctgagaccactgcaagcataggagctttgcacatacattcatacatacataca 500
Query: 301 tatatgcatacatacatgcatatatacatacacacatatg 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatatgcatacatacatgcatatatacatacacacatatg 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
