Query= MSMg01no320_j22.b1 MSMg01no320_j22.b1 CHROMAT_FILE:
MSMg01no320_j22.b1 PHD_FILE: MSMg01no320_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:10 2005
(226 letters)
>mm_chr6_114806456_114807081
Length = 626
Score = 352 bits (182), Expect = e-101
Identities = 217/238 (91%), Gaps = 17/238 (7%)
Strand = Plus / Plus
Query: 1 ctttatgtgacatctagggacttgagctcaggtcttcatgcttgcatggcaagtgg---- 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ctttatgtgacatctagggacttgagctcaggtcttcatgcttgcatggcaagtggtttt 253
Query: 57 ---ttttttttatctactacaccatcatatctcctcagcccttttgtgttttggttggca 113
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 254 tttttttttttatctactacaccatcttatctcctcagcccttttgtgttttggttggca 313
Query: 114 tgtccccaaagaccaacaggtgtttctcttttttgtgtgacttaagagacctttgccttc 173
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 314 tgtcccgaaagaccaacaggtgtttctcttttttgtgtgacttaagagacctttcccttc 373
Query: 174 tctggctgcaagcttttt-----ctactgaggactcaccgcccttttaggctgttttg 226
||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 374 tctggctgcaagc-----agggcctactgaggactcaccgcccttttagcctgttttg 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 626
Length adjustment: 9
Effective length of query: 217
Effective length of database: 617
Effective search space: 133889
Effective search space used: 133889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_j22.g1 MSMg01no320_j22.g1 CHROMAT_FILE:
MSMg01no320_j22.g1 PHD_FILE: MSMg01no320_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:10 2005
(169 letters)
>mm_chr6_114992243_114992811
Length = 569
Score = 319 bits (165), Expect = 5e-92
Identities = 168/169 (99%)
Strand = Plus / Minus
Query: 1 cactaatgatttccacacagctgatttctcattctcaccagacgcctcccaggccattta 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 369 cactaatgatttccacacagctgatttctcattctcaccagacacctcccaggccattta 310
Query: 61 aaacctggctttgtggcccacacttctctctctgcttcacctctacccttcaccccactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaacctggctttgtggcccacacttctctctctgcttcacctctacccttcaccccactc 250
Query: 121 atccccagagctgattcgtgtccccttattcttagcactgggtgcctgc 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atccccagagctgattcgtgtccccttattcttagcactgggtgcctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
