Query= MSMg01no322_g23.b1 MSMg01no322_g23.b1 CHROMAT_FILE:
MSMg01no322_g23.b1 PHD_FILE: MSMg01no322_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:24 2005
(376 letters)
>mm_chr6_103352618_103353389
Length = 772
Score = 598 bits (309), Expect = e-175
Identities = 354/371 (95%), Gaps = 6/371 (1%)
Strand = Plus / Plus
Query: 7 attcctcacacaactgccaattcaaaagtagatactaagcaaaccattccattaccagtg 66
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attcctcacacaactgg-aattcaaaagtagatactaagcaaaccattccattaccagtg 265
Query: 67 tttaagtctctgtgggactttaaatttttctcccttgaagctaaattcatgtttttaaag 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttaagtctctgtgggactttaaatttttctcccttgaagctaaattcatgtttttaaag 325
Query: 127 ttcggcttacatttcattttgaaaaggtacagtaaacacaatgaagtttttactgcagta 186
|| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 326 tttggcttacattttattttgaaaagatgcagtaaacacaatgaagtttttactgctgta 385
Query: 187 taaaactgaaaggctatggaaaacaccgtgtgttccaccatttgatatggtatttgattg 246
|||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 386 taaaaccgaaaggttatggaaaacaccctgtgttccaccatttgatatggtatttgattg 445
Query: 247 tagcgggcggggggggggggtggncg-gacaatgtgtctttaaatagaaactcttgggtt 305
||||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 446 tagcgggtgggggggggggg----cgcgacaatgtgtctttaaatagaaactcttgggtt 501
Query: 306 tcctcatgcaccaaatccaatcatttgttcacctgctcatcacattttgttctacatttg 365
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcctcatgcaccaaattcaatcatttgttcacctgctcatcacattttgttctacatttg 561
Query: 366 ccatgcactgg 376
|||||||||||
Sbjct: 562 ccatgcactgg 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 772
Length adjustment: 9
Effective length of query: 367
Effective length of database: 763
Effective search space: 280021
Effective search space used: 280021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_g23.g1 MSMg01no322_g23.g1 CHROMAT_FILE:
MSMg01no322_g23.g1 PHD_FILE: MSMg01no322_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:24 2005
(653 letters)
>mm_chr6_103517450_103518503
Length = 1054
Score = 919 bits (475), Expect = 0.0
Identities = 491/497 (98%), Gaps = 3/497 (0%)
Strand = Plus / Minus
Query: 1 attttatgtaaaccatg-aaaaaatgtgacaattacaaagagaatgatttaagaaaccac 59
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 attttatgtaaaccatgaaaaaaatgtgacaattacaaagagaatgatttaagaaaccac 438
Query: 60 agtggaaaattgaacgtcccactgaaacacttgtggctttttagttgaagaaatatatgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agtggaaaattgaacgtcccactgaaacacttgtggctttttagttgaagaaatatatgg 378
Query: 120 tctaaaatgtaatctttgacagcagaaactattaaaatgtaaaatgggaaaatttaatca 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 377 tctaaaatgtaatctttgacagcagaaactattaaaatgtacaatgggaaaatttaatca 318
Query: 180 gaatcactgtaaagtgtaactttgttctactctgcttttctaaaacaacacttctcccag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gaatcactgtaaagtgtaactttgttctactctgcttttctaaaacaacacttctcccag 258
Query: 240 cttcattcttctcacagcttctttactgaagctgtcagcttagacaataactgggaatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cttcattcttctcacagcttctttactgaagctgtcagcttagacaataactgggaatca 198
Query: 300 gaacagagaatgcttttgaaatcatttaaccctgtgcctccatgttgtgcaaacaggcag 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 197 gaacagagaatgcttttgaaatcatttaaccctgtgcctccatgttgtggaaacaggcag 138
Query: 360 ttcaagttccaagggctaaaagggatttatccaaaaccacactgtaagtcagcaggaagg 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ttcaagttccaagggctaaaagggatttatccaaaaccacactgtaagtcagcaggaaga 78
Query: 420 tggggaactgggatgctgacttgggggctggaggggggg--catgcagtcattcagttct 477
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 77 tggggaactgggatgctgacttgggggctggaggggggggacatgcagtcattcagttct 18
Query: 478 ctgagatacaaaggact 494
|||||||||||||||||
Sbjct: 17 ctgagatacaaaggact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space: 671292
Effective search space used: 671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
