Query= MSMg01no323_a06.b1 MSMg01no323_a06.b1 CHROMAT_FILE:
MSMg01no323_a06.b1 PHD_FILE: MSMg01no323_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:06 2005
(661 letters)
>mm_chr6_106700135_106701195
Length = 1061
Score = 1187 bits (614), Expect = 0.0
Identities = 647/658 (98%), Gaps = 2/658 (0%)
Strand = Plus / Minus
Query: 1 tataacctatgtaaattcctgcctttgtttatgtcctttgagttcacaggaaaacatggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tataacctatgtaaattcctgcctttgtttatgtcctttgagttcacaggaaaacatggg 798
Query: 61 agaatgggaagcgtattgtttattttttattggtagagtaagttaaaatatcaaacagca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 797 agaatgggaagcgtattgtttattttttattggtagagtaagttaaaatatcaaaccgca 738
Query: 121 cacttggggaacaa-cagcattcagagacatagccggaataattttctgaaaatcttcag 179
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cacttggggaacaatga-cattcagagacatagccggaataattttctgaaaatcttcag 679
Query: 180 agtgtctggcattgtgcgtatctgaaatctgtaaatacattttgaataaccatgtgtaag 239
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 678 agtgtctggcattgtgcatatctgaaatctgtaaatacattttgtataaccatgtgtaag 619
Query: 240 aaatacaacaaatgttaaaagtagcctttcagtatacagcgttccgtgcttatgatgagt 299
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 618 aaatacaacaaatgttaaaagtagcctttcaggacacagcgttccgtgcttatgatgagt 559
Query: 300 agtattttcagtgttctttagtaatgcatctaaactaagacacacagtactctgaagagt 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 558 agtattttcagtgttctttagtaatgcatctaaactaagacacatagtactctgaagagt 499
Query: 360 aggtaggccagatggctgaaactctgtctaacctttcctggacagctctcagcaaagagc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aggtaggccagatggctgaaactctgtctaacctttcctggacagctctcagcaaagagc 439
Query: 420 aggagttttttctgcttcttgtttcacttcttctttccccaaggaagatcacattgtttg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aggagttttttctgcttcttgtttcacttcttctttccccaaggaagatcacattgtttg 379
Query: 480 ggtcatcaaacaacgattgatctggtttcattttggcttctctttcaaacggttaccttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggtcatcaaacaacgattgatctggtttcattttggcttctctttcaaacggttaccttg 319
Query: 540 ggaaccccgggcacagacacagcactgtacttacaccgtgcgagcagacactgagccccg 599
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 318 ggaaccccgggcacagacacagcactgtacttacaccgtgcgagcggacactgagccccg 259
Query: 600 cagcaacttttttcaggggactcatcatttatcatctcacaaacagaaacacggattt 657
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 258 cagcaacttttttcaggggactcatcatttatcatctcacaaacagaaacactgattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_a06.g1 MSMg01no323_a06.g1 CHROMAT_FILE:
MSMg01no323_a06.g1 PHD_FILE: MSMg01no323_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:06 2005
(640 letters)
>mm_chr6_106516503_106517542
Length = 1040
Score = 1191 bits (616), Expect = 0.0
Identities = 634/640 (99%)
Strand = Plus / Plus
Query: 1 ctggaatctagtcataagacaaaaaaaaatcactagtaaaaaataaagcaatttttttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggaatctagtcataagacaaaaaaaaatcactagtaaaaaataaagcaatttttttac 260
Query: 61 ctcccttttagaacagtgggaaattgatagtgcttttaatatcaatagtatgagtggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcccttttagaacagtgggaaattgatagtgcttttaatatcaatagtatgagtggcac 320
Query: 121 cagcagccttgactcttaatcacctcaaattttcagtaatgaattggcagcctttgtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcagccttgactcttaatcacctcaaattttcagtaatgaattggcagcctttgtatc 380
Query: 181 cataggctttatagttgcagagagttgtaggggacacaggtaatggcttgatttcaaggc 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 cataggctttatagttgcagagagttgcaggggacacaggtaatggcttgatttcaaggc 440
Query: 241 tgggtcagaaccagctaaaccccttagagaagagaggtatatgaaatctttgaattatct 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 tgggtcagaaccagctaaaccccttagagaagagaggtaaatgaaatctttgaattatct 500
Query: 301 cagcagtgcctttgttcagatgaaatagcttgctatcgtcaaatgggtttaagtgatcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagcagtgcctttgttcagatgaaatagcttgctatcgtcaaatgggtttaagtgatcat 560
Query: 361 gaaaatatccaaaccaaagtggtgtgtaattaagagcaattagaaccagagtgacgtaac 420
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaatatccaaaccaaagtggcatgtaattaagagcaattagaaccagagtgacgtaac 620
Query: 421 tggtattcctgttcagttcggaagcaaggccataactggagttcctcctgactttgccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggtattcctgttcagttcggaagcaaggccataactggagttcctcctgactttgccat 680
Query: 481 cgcaggacaaatctgtttgatggcttatgtaaacattgaagacctgagatcacacagtgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 cgcaggacaaatctgtttgatggcttatgtaaacattgaagacctgagatcacacggtgt 740
Query: 541 tttgggccctgacttttctgttttatattttcgccttcatatttcagtaacatatatgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttgggccctgacttttctgttttatattttcgccttcatatttcagtaacatatatgcc 800
Query: 601 atagttaattatgatccttctagtaaatatccatcgtggt 640
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 801 atagttaattataatccttctagtaaatatccatcgtggt 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
