AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTGCATTTGCCACACTGCAATCGGAGTAATTTTGTCTTTTGTAAAATG
CAACTATTTTAATATACAGCAGACAAAATAATAATTTTGTTACTCATACG
ATGAATGACCTATGGTTGTAAAGATCTTACTACATAATCAGTATAAAAAA
CAAAGTTGGCTATAAATGCCTTAAAATCTTGAGACTGTGCTAGACATTTC
CTAAGTACCTACATCTGCATATTGTCTGAAGTCTGTCCCATAGATAGTTC
CTGCTGGATCGATGGCAGCTTCCCTAGTCTCTAGTTTTCTTCTAGTCTTG
GAATCTCTAGCACACAGAACGGAAGCCCTCACAGATAAAGGATGCCACTG
ATCACAAGGATGTCTGTGCCACCACAATCACACATCAGAGCAGACAGCTG
GTGAAGCTCAGAGCTGCCTGGTTATGAGTGAAAATGTGTTCCCCTTTCAA
ACGTGGCAGGAAGAAGGACACTTAGGAAGGCTTTGCCAAGCTTTGGGTTC
AGGTCCCGCTCTGTCTCCATACACTACTTATTTACTTTCCTAAGCCTGCT
TCCTCACATAAAACAATGCATGTGAGGAAAGTTAGGAAGAATCGGGAACA
GAAAGTGCTGTGATAAGCAAATCTAAGTCCCATTCTAAGACTTTCAACTC
TGATGTTATTCCTATAAATATCGTTTTTGTTTGA

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAATTCTGTATGCTATTTTTA
AATTGAGTTATTTGGTGTTTTGGAGGTTAGCTACTTGAGATCTTTTTGGA
TTATTAGTTTTCTATCAGATGTGGAGTTAGTGATGTTTTTTTCCCCATTC
TGTAGGTTTCTAATTTGTTCTATTGACTGTGTCTTTTGCCTTACAGAAAG
AAATGCAGGGACAAAAATGGAGAAGAGACTGAGAAAAAGGTAGTCCAGTG
AGCAGCCCAACTAGGGATCCACCTCATGGGAATTAACTGAGACCTGACAC
TATGACTGATGCAATGATGAGCTTATATACAGTAGCCTAGCATGGCTGTC
CTCTGAGAGGCCTTACCAGCAGCTGACTGAGACAGATGCAGACACTTACA
GCCAACCATTGGACTGAACTCGGTGACCCCTTTGGTTGAATTAGGAGAAA
GATAGAAGAGGCAGAAGAGGAGGGCAACCCCATAGCAAGACCAGCAGTTT
CAACTATCCCAAACCCCTGGGATTTCTCAAACACTGAGCCACAAACCAGG
CAGTATACAGGGTCTGGTCCAAGGCCCCTGACACATATGGAGCAGAGCAC
TGGCCTGGTCTTAGTGGGAAAAGATGCCCCAAATCCTTGAAAGAATTGAG
GCCCCAGGGAGGGGGACCTGGTGGTGAGGGAG

Query= MSMg01no324_e19.b1 MSMg01no324_e19.b1 CHROMAT_FILE:
MSMg01no324_e19.b1 PHD_FILE: MSMg01no324_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:35 2005
         (667 letters)



>mm_chr6_17040019_17041086
          Length = 1068

 Score = 1191 bits (616), Expect = 0.0
 Identities = 655/668 (98%), Gaps = 1/668 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcaatcggagtaattttgtcttttgtaaaatgcaactattttaatatacagcagacaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 tgcaatcggagtaattttgtcttttgtaaaatgcaactattttaatatacagcagacaaa 809

                                                                       
Query: 61  ataataattttgttactcatacgatgaatgacctatggttgtaaagatcttactacataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ataataattttgttactcatacgatgaatgacctatggttgtaaagatcttactacataa 749

                                                                       
Query: 121 tcagtataaaaaacaaagttggctataaatgccttaaaatcttgagactgtgctagacat 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 748 tcagtataaaaaacaaagttggctctaaatgccttaaaatcttgagactgtgctagacat 689

                                                                       
Query: 181 ttcctaagtacctacatctgcatattgtctgaagtctgtcccatagatagttcctgctgg 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 688 ttcctaagtacctacatctgcatattgcctgaagtctgtcccatagatagttcctgctgg 629

                                                                       
Query: 241 atcgatggcagcttccctagtctctagttttcttctagtcttggaatctctagcacacag 300
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 628 atcgatggcagcttccctaatctctagtttttttctagtcttggaatctctagcacacag 569

                                                                       
Query: 301 aacggaagccctcacagataaaggatgccactgatcacaaggatgtctgtgccaccacaa 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aacagaagccctcacagataaaggatgccactgatcacaaggatgtctgtgccaccacaa 509

                                                                       
Query: 361 tcacacatcagagcagacagctggtgaagctcagagctgcctggttatgagtgaaaatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tcacacatcagagcagacagctggtgaagctcagagctgcctggttatgagtgaaaatgt 449

                                                                       
Query: 421 gttcccctttcaaacgtggcaggaagaaggacacttaggaaggctttgccaagctttggg 480
           |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 448 gttcccctttcaaacgtggcaggacgaagggcacttaggaaggctttgccaagctttggg 389

                                                                       
Query: 481 ttcaggtcccgctctgtctccatacactacttatttactttcctaagcctgcttcctcac 540
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttcaggtcctgctctgtctccatacactacttatttactttcctaagcctgcttcctcac 329

                                                                       
Query: 541 ataaaacaatgcatgtgaggaaagttaggaagaatcgggaacagaaagtgctgtgataag 600
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ataaaacaatgcgtgtgaggaaagttaggaagaatcgggaacagaaagtgctgtgataag 269

                                                                       
Query: 601 ca-aatctaagtcccattctaagactttcaactctgatgttattcctataaatatcgttt 659
           || ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 268 cacaatctaagtcccactctaagactttcaactctgatgttattcccataaatatggttt 209

                   
Query: 660 ttgtttga 667
           ||||||||
Sbjct: 208 ttgtttga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1068
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1058
Effective search space:   695106
Effective search space used:   695106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)