CCTAGTTTGCGGCCCTATACGACTCACATATTCGCAGTCCGCGGATTCCC
TGTAACTGTCAACACTATTTTTAGTAACTCTGAGTCACCAAACCTTTGGC
TCTATTTTGTTGTTCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTTGCTTTACTTCATAATCCTAACGACTTCAAGCCAAATCATTGAATCA
TCCCAGAAAAACACCCTCTCCATAAATGAACACACATCACAGCTACCTAT
TAATACCCAGGCAAATACAGAAATCATCCAGACGCACCACTTCAAGATTA
ATACCAAAAAACTATTTTTTTTAGCTATACAATGTCACATACACAATTAC
CAACAACAAATACACACCCCCCCCCCCACCTAAAAAAAAGAAACAAATAA
TACACACAAAATCACACCCCCCCCTATATCAAAATACAAAAACTCATCTA
ACAAATACAAATAATTAACCACCTCACACACAAATCACATTCACNTACCA
CCACAAATAATAACCCAAAATTAAACACCAACAACACAACTTCTCTAACC
AACAAAACAAACAAAAAATAAAAAAAAACACACAAACCCACAACCCCACA
TAAAAAACAAGTAGAAGAACACGAAAAACCAATCAAAAAAAAACACACAA
CCAAACGCCCCAAAAAATAACACCTATATACCAACAACCAAACAACAAAA
TAACACCAACCACCAAACAAAACCACCAACACAAACATCAATCACCAAAC
AAATTACCAACATCATAAAAAAAATCACCCAAC

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTAGAAAGCCATTAAATCATCTAAAT
AGTATTAATTTATGAAAGCTCGTCTTCATGTTGATCTGCAGGAAATTTGC
CCAGTAGGATGAGCTGATGCCCAGGAATTATTAGGCTATGTAATAGTGTC
AGGAAAGGAATATCTGTATTGAGGCACAATCCTGGGATGAAGTCTCTGGG
GTTGTGCCTCTTCAGACTACACCTATCACAGCCATGCAAAGCAGTGGGCT
ATCTCTACAAAGTTCATTTGCTTGCCTTAGTCTTTTCTAAATGGCTCCTG
TCATGACAAGTCTAAGAGAATCTGCACAGAGACTTGATATCACCCCCCTC
CAACAGATAGGAAGTTGTCTCTTTTTTAGGGGATAGGGGTCAGGTATTAA
ATCAAAAACTGAGAAAGATGCTCAGTGAATACCTGTAGACCTGATGTTTG
TAGTGACATATTACTTCTGAATGTAGGGAGGACATTTCTTCAACAGTTTC
CTTTAAGTCCTGCAATGTCACTACAGATTATCTCCCTCCTTGCAGCAGCC
GGCAGGTAGTTTTGTTTGATGTCTATTAGGCTCTAATTCATATATAAGGT
CCATAATTCAATGATAGTAGATAGCCAAAGGATCCCCTTTTCTTTAAAGG
GTAAATACCTTGGTATCG

Query= MSMg01no325_k12.g1 MSMg01no325_k12.g1 CHROMAT_FILE:
MSMg01no325_k12.g1 PHD_FILE: MSMg01no325_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:12 2005
         (529 letters)



>mm_chr6_107629487_107630416
          Length = 930

 Score =  955 bits (494), Expect = 0.0
 Identities = 518/526 (98%), Gaps = 1/526 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagaaagccattaaatcatctaaatagtattaatttatgaaagctcgtcttcatgttgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaaagccattaaatcatctaaatagtattaatttatgaaagctcgtcttcatgttgat 260

                                                                       
Query: 61  ctgcaggaaatttgcccagtaggatgagctgatgcccaggaattattaggctatgtaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgcaggaaatttgcccagtaggatgagctgatgcccaggaattattaggctatgtaata 320

                                                                       
Query: 121 gtgtcaggaaaggaatatctgtattgaggcacaatcctgggatgaagtctctggggttgt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 321 gtgtcaggaaaggaatatctgtattgaggcacaatcctgggatgaagtctctggggtcat 380

                                                                       
Query: 181 gcctcttcagactacacctatcacagccatgcaaagcagtgggctatctctacaaagttc 240
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctcttcagagtacacctatcacagccatgcaaagcagtgggctatctctacaaagttc 440

                                                                       
Query: 241 atttgcttgccttagtcttttctaaatggctcctgtcatgacaagtctaagagaatctgc 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttgcttgccatagtcttttctaaatggctcctgtcatgacaagtctaagagaatctgc 500

                                                                       
Query: 301 acagagacttgatatcacccccctccaacagatagg-aagttgtctcttttttaggggat 359
           |||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 acagagacttgatatcatgcccctccaacagatagggaagttgtctcttttttaggggat 560

                                                                       
Query: 360 aggggtcaggtattaaatcaaaaactgagaaagatgctcagtgaatacctgtagacctga 419
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggggtcaggtattaaatcaaaaactgagaaagatgctcagtgaatacctgtagacctga 620

                                                                       
Query: 420 tgtttgtagtgacatattacttctgaatgtagggaggacatttcttcaacagtttccttt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtttgtagtgacatattacttctgaatgtagggaggacatttcttcaacagtttccttt 680

                                                         
Query: 480 aagtcctgcaatgtcactacagattatctccctccttgcagcagcc 525
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagtcctgcaatgtcactacagattatctccctccttgcagcagcc 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 930
Length adjustment: 10
Effective length of query: 519
Effective length of database: 920
Effective search space:   477480
Effective search space used:   477480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)