Query= MSMg01no325_m07.b1 MSMg01no325_m07.b1 CHROMAT_FILE:
MSMg01no325_m07.b1 PHD_FILE: MSMg01no325_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:20 2005
(352 letters)
>mm_chr6_145948688_145949439
Length = 752
Score = 640 bits (331), Expect = 0.0
Identities = 346/351 (98%), Gaps = 2/351 (0%)
Strand = Plus / Minus
Query: 1 tcggtactctgtgatgaagagaaatttttgctagctctaaaaagctgtctctgatgagtc 60
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 354 tcggtactctgtgatgaagagaaatttttg-tagctctaaaaagctgtttctgatgagtc 296
Query: 61 ataaacctgcttgtatattctaacacaattgctagtggcgaaaactaagctgacggtaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gtaaacctgcttgtatattctaacacaattgctagtggcgaaaactaagctgacggtaaa 236
Query: 121 gatggt-ggtggggacagtttaaaagtgcccccaatcctaaatacttcacaagtttcacc 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gatggtgggtggggacagtttaaaagtgcccccaatcctaaatacttcacaagtttcacc 176
Query: 180 ttggtcttcaaaaccaccctgtgtgggaggggctctcggtgtcccatgtcacagacaagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ttggtcttcaaaaccaccctgtgtgggaggggctctcggtgtcccatgtcacagacaagg 116
Query: 240 acccacacaaaatgctaactgcactccaggatcagagtcagtataagtagcggatgggga 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 115 acccacacaaaatgctaactgcactccaggatcagagtcagtataagtagcggatgagga 56
Query: 300 accctctccaggcacctgggccttccttgacctctggttatgctgatccca 350
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 accctctccaggcacctgggccttccttgacctctggttatgctgatccca 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_m07.g1 MSMg01no325_m07.g1 CHROMAT_FILE:
MSMg01no325_m07.g1 PHD_FILE: MSMg01no325_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:20 2005
(550 letters)
>mm_chr6_145875461_145876410
Length = 950
Score = 963 bits (498), Expect = 0.0
Identities = 537/550 (97%)
Strand = Plus / Plus
Query: 1 caccttcctgtcagtgagaacccatctcttctcaagcagcttccatgtggaaagcaccag 60
||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||
Sbjct: 201 caccttcctgtcagtgagatcccgtctcttctcaagcagcttccatttggaaagcaccag 260
Query: 61 ctggtttttctgtctttcacagcagcctggctcttttcatcttatcaagcctgacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggtttttctgtctttcacagcagcctggctcttttcatcttatcaagcctgacacaca 320
Query: 121 cttccatgctagcccgcatcacaggaggatcatgagcccagctacctctaacagtgatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttccatgctagcccgcatcacaggaggatcatgagcccagctacctctaacagtgatga 380
Query: 181 gaacacttaaggcacgcttgctaatgcttcttcagtatgaggacacagcacgagggctgg 240
||||| |||||||||||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 381 gaacatttaaggcacgcttgctaacgcttcttcagtatgaggacacagcacaaaggctgg 440
Query: 241 cagctagctgacaagaaggaacagtaaaaggcacagggcttagaaaaggagcgtgtcctt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggtagctgacaagaaggaacagtaaaaggcacagggcttagaaaaggagcgtgtcctt 500
Query: 301 tggcctttagagggttaagactgcgctatgtgcaggacttagcaccacttgcccaccagg 360
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 501 tggcctttagagggttaagactgcgctatgtgcaggacttagcaggacttggtcaccagg 560
Query: 361 ccatctcccagcatgcaaatagccattctaggcatagctgagtaagatcctaccacactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccatctcccagcatgcaaatagccattctaggcatagctgagtaagatcctaccacactg 620
Query: 421 ctttggtgcaatgatcaaccctcactgtcctcttgactagatttagcatcacttaggaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctttggtgcaatgatcaaccctcactgtcctcttgactagatttagcatcacttaggaga 680
Query: 481 ccattgaggcacacccctagctaggtacgctgtgggcttctccagagaggatcagctgac 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 ccattgaggcacacccctagctaggtacgctgtgggcttctccaaagaggatcagctgac 740
Query: 541 caaggaagac 550
||||||||||
Sbjct: 741 caaggaagac 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
