Query= MSMg01no326_p07.b1 MSMg01no326_p07.b1 CHROMAT_FILE:
MSMg01no326_p07.b1 PHD_FILE: MSMg01no326_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:45 2005
(224 letters)
>mm_chr6_83581043_83581667
Length = 625
Score = 375 bits (194), Expect = e-108
Identities = 215/222 (96%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 4 gaattctgttttaccat-ctaaatgtctgtttccattggtttccaccttatgctgatgtg 62
||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgtttaagtattctaaatgtctgtttccattggtttccaccttatgctgatgtg 263
Query: 63 aagtctggtcttctttcatgggtgactttgatagggaaactaatgttttccctaattcca 122
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 264 aagtctggtcttctttcatgggtgactttgatagggaaactcatgttttccctaattcca 323
Query: 123 tggcttttgcttgctatctaaaatgaaggttaggattttgagactgagacaggaggatcc 182
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggtttttgcttgctatctcaaatgaaggttaggattttgagactgagacaggaggatcc 383
Query: 183 tgagttcagagccagcctaagctatataatgaaggctttggg 224
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgagttcagagccagcctaagctatataatgaaggctttggg 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 625
Length adjustment: 9
Effective length of query: 215
Effective length of database: 616
Effective search space: 132440
Effective search space used: 132440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no326_p07.g1 MSMg01no326_p07.g1 CHROMAT_FILE:
MSMg01no326_p07.g1 PHD_FILE: MSMg01no326_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:45 2005
(272 letters)
>mm_chr6_83762151_83762821
Length = 671
Score = 503 bits (260), Expect = e-147
Identities = 269/272 (98%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 1 ttgtaaaaaacacattagttatatttgtgaacgatttatattcatattctgataatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 471 ttgtaaaaaacacattagttatatttgtgaacgatttatattcatattccgataatttta 412
Query: 61 atattaaagagaaaagggactcagttctgctaagcaggaggcaaataccaattctctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atattaaagagaaaagggactcagttctgctaagcaggaggcaaataccaattctctgca 352
Query: 121 acttggaggtattgtcactggcgagacatgacataggatgtagaagacactgctcagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 acttggaggtattgtcactggcgagacatgacataggatgtagaagacactgctcagttg 292
Query: 181 tgtgttaggggtcttttacattcctgttttctaactggaggaatttttttttcttaagct 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 291 tgtgttaggggtcttttacattcctgttttctaactggaggaa-ttttttttcttaagct 233
Query: 241 cctatcatttccccatgcgtgactaataactg 272
||||||||||||||||||||| ||||||||||
Sbjct: 232 cctatcatttccccatgcgtgtctaataactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 671
Length adjustment: 9
Effective length of query: 263
Effective length of database: 662
Effective search space: 174106
Effective search space used: 174106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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