Query= MSMg01no328_c16.b1 MSMg01no328_c16.b1 CHROMAT_FILE:
MSMg01no328_c16.b1 PHD_FILE: MSMg01no328_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:14 2005
(545 letters)
>mm_chr6_128303986_128304930
Length = 945
Score = 973 bits (503), Expect = 0.0
Identities = 526/537 (97%), Gaps = 7/537 (1%)
Strand = Plus / Minus
Query: 6 gaattcagcgtgtatccgcgttgaaatcaaatgatatcgcgttcagttgagggatttagt 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gaattcagcgtgtatccg-gttgaaatcaaatgatatcgcgttcagttgagggatttagt 593
Query: 66 tgttaactaaatgatttttagagaagtaaatttcttagggatgtgattttatttttattt 125
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tgttaacgaaatgatttttagagaagtaaatttcttagggatgtgattttatttttattt 533
Query: 126 tattttttgagataggtcttatgaagcaggactgaaactcgatattcaaaccaggttagc 185
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 532 tattttttgagataggtcttatgaagcaagactgaaactcgatattcaaaccaggttagc 473
Query: 186 ctcaaactcatacagacccatctgactctgccttccatgactcatgattttagggaacaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctcaaactcatacagacccatctgactctgccttccatgactcatgattttagggaacaa 413
Query: 246 ggacttgactttgaaactgggaccagctggcaggtttttgttttgttttgttttcatctc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggacttgactttgaaactgggaccagctggcaggtttttgttttgttttgttttcatctc 353
Query: 306 ctggacttgaagctttaaggagtaattttaatgcctcctcccccaccttttcttccaaag 365
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 352 ctggacttgaagctttaag------ctttaatgcctcctcccccaccttttcttccaaag 299
Query: 366 aaagaaatcgactctttaatttccagttgattgacgggaaaggagcccgtgggagcccct 425
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 298 aaagaaatcgactctttaatttccagttgattgacaggaaaggagcccgtgggagcccct 239
Query: 426 agtttctcctgccctaggaagagcatgcaggtttgttgctaaaagccagtgactgccttg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agtttctcctgccctaggaagagcatgcaggtttgttgctaaaagccagtgactgccttg 179
Query: 486 cttttggggtagtcattaagagtgttttgagagagacttcgagactgacttgactga 542
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 cttttggggtagtcattaagagtgttttgagagagacttcgagactgacttgactga 122
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_c16.g1 MSMg01no328_c16.g1 CHROMAT_FILE:
MSMg01no328_c16.g1 PHD_FILE: MSMg01no328_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:14 2005
(537 letters)
>mm_chr6_128136341_128137277
Length = 937
Score = 1015 bits (525), Expect = 0.0
Identities = 534/537 (99%)
Strand = Plus / Plus
Query: 1 ctgcagagagcgaaaggataaactaatgtctagagtccaagtacacctagactatgaacc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcagagagcaaaaggataaactaatgtctagagtccaagtacacctagactatgaacc 260
Query: 61 ttaaaactattctaggaagattagcttcatcaagactgtgtgacatggaggtctacacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaactattctaggaagattagcttcatcaagactgtgtgacatggaggtctacacga 320
Query: 121 tgagaagttctgcaacccaaagaatattagaccagcttcccaaaaccaatgttaaatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagaagttctgcaacccaaagaatattagaccagcttcccaaaaccaatgttaaatcct 380
Query: 181 ggcatacctgtctagagggttccacaagattgaaaacattcttcatccagtcagatgact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcatacctgtctagagggttccacaagattgaaaacattcttcatccagtcagatgact 440
Query: 241 gcgtctaaacttagcactaagcacctcaaagctctctttggcctcctacttcctccaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcgtctaaacttagcactaagcacctcaaagctctctttggcctcctacttcctccaaat 500
Query: 301 tacaactagaaaatggactcacaaaatatgtttttgacacttgcacaacttctgaccaaa 360
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 501 tacaactagaaaatggactcacaaaatatgtttttgacacttgtataacttctgaccaaa 560
Query: 361 acttgctgtaggatatttatagaacaaataacttcatttgtgagaaagttatcagctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttgctgtaggatatttatagaacaaataacttcatttgtgagaaagttatcagctaaa 620
Query: 421 tgtggccctaggaaaaatgcctcacatatatgtcttgcttccaaatgaatgattcctgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtggccctaggaaaaatgcctcacatatatgtcttgcttccaaatgaatgattcctgta 680
Query: 481 tggtagattggaaagtgaggcaaacactggttttgacgaccagagcattggctggtg 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggtagattggaaagtgaggcaaacactggttttgacgaccagagcattggctggtg 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
