Query= MSMg01no328_m03.b1 MSMg01no328_m03.b1 CHROMAT_FILE:
MSMg01no328_m03.b1 PHD_FILE: MSMg01no328_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:00 2005
(568 letters)
>mm_chr6_108438803_108439767
Length = 965
Score = 992 bits (513), Expect = 0.0
Identities = 550/563 (97%), Gaps = 3/563 (0%)
Strand = Plus / Minus
Query: 6 gaattctggttttattgacgtacaccactggaaccagggctttttggatggtaggtgaac 65
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 851 gaattctggttttattgatgtacaccactgcaaccagggctttttggatggtaggtgagc 792
Query: 66 actgtatcagctgagctatacccagcttttcggagtttagaaaaaaaaattgcaaaatga 125
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 791 actgtatcagctgagctatacccagcttttcggagtttag-aaaaaaaattgcaaaatga 733
Query: 126 ccagcagtaagccaaaggccaaggtacctaaagagaggcttgctccctctgtaaagctct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ccagcagtaagccaaaggccaaggtacctaaagagaggcttgctccctctgtaaagctct 673
Query: 186 gctttgcacagaggctattttgggagtctggcataaaagaatggacagtccatgcccatg 245
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gctttg--cagaggctattttgggagtctggcataaaagaatggacagtccatgcccatg 615
Query: 246 cagaataccccttttctctgatttcttaagctaggcaggagggacatgaagttttctgtg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cagaataccccttttctctgatttcttaagctaggcaggagggacatgaagttttctgtg 555
Query: 306 caccccattaagcctccattctggggctattgagaaaccctttcggatgctagatgctga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 caccccattaagcctccattctggggctattgagaaaccctttcggatgctagatgctga 495
Query: 366 gtatggaggcaacgcgccacaagggagtgtctgaaatcattcagtacacatgcagagaca 425
|||||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtatggaggcaatgtgggacaggggagtgtctgaaatcattcagtacacatgcagagaca 435
Query: 426 gagacctagtaactccaggcctcttgccttctttgtattatgcccaggtcctgtacctaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gagacctagtaactccaggcctcttgccttctttgtattatgcccaggtcctgtacctaa 375
Query: 486 gtttaaaagaggctaaggaaaggacaggtcaatctccactgggcttcagctttcccatcc 545
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 374 gtttaaaagaggctaaggaaaggagaggttaatctccactgggcttcagctttcccatcc 315
Query: 546 ccacccaacacctgaagacacta 568
|||||||||||||||||||||||
Sbjct: 314 ccacccaacacctgaagacacta 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 965
Length adjustment: 10
Effective length of query: 558
Effective length of database: 955
Effective search space: 532890
Effective search space used: 532890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_m03.g1 MSMg01no328_m03.g1 CHROMAT_FILE:
MSMg01no328_m03.g1 PHD_FILE: MSMg01no328_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:00 2005
(346 letters)
>mm_chr6_108277241_108277986
Length = 746
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Plus
Query: 1 tttgggtttggttaaaaagtgtaagcttgaaaataaatttcaaaggtggtttttaagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgggtttggttaaaaagtgtaagcttgaaaataaatttcaaaggtggtttttaagact 260
Query: 61 ttctattgaacaaagagtaaaacctggagactggagaacggtcggacgtgcagcgccgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctattgaacaaagagtaaaacctggagactggagaacggtcggacgtgcagcgccgac 320
Query: 121 cttcagcagtgacgagccagcaccttgcttcatggacttgattaacgtgatgtcatttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcagcagtgacgagccagcaccttgcttcatggacttgattaacgtgatgtcatttcc 380
Query: 181 agacattgtgttatttggtttgagaggacattttcaagttgcttccaattccagctgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacattgtgttatttggtttgagaggacattttcaagttgcttccaattccagctgttg 440
Query: 241 gggtagaatcggcaacccaggaaagccgtcctgtgctctgttgcaggccccctgggccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtagaatcggcaacccaggaaagccgtcctgtgctctgttgcaggccccctgggccaa 500
Query: 301 aagggatcaggcctgataaactgcattgcctgagtgagtctgtg 344
|||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 aagggatcaggcctgaaaaactgcattgcctgagtgagtctgtg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
