TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAACTAACTTTCCTTTTATTACGCAAACACCACTAGGGCTGCTTGA
TTTCACCCACCCCCCGCCCCCCAAATCCCTTAGCCTCTTTGCAGCCAAGC
TGGCTTTCTGGCTAGGCCAGCTAGGAATCCAGCTAAGGAGGGATCCTCAA
GCAGCGCCAGAGGCAAAACACCCGATTAAACCTCTTCAAAAGTCCTCCAC
TGCCCCCCCCCCAATGCCGGTGTGAGGTGCTGTCCTGTTTGCAGTCCCAG
GCCCCCACTCGCTTCTGCGAAGCACCCTTCTATGGGTGCGGACAGCGTGG
CCCTCATCTACCACCCAACTTGGCGCCCGCGCCCCCACGGATGCCCTGGG
TACCTGCCTCCCGCCCCCGCGCGCCTACCTGGCTGGCTGGTGGCACTCGG
GACGCGGTTGTAGGCGCCGCCGTACTGGTGGTAGGGGCTGGCGTAGCCGT
AGTCGGCATAAGCCTTGGCCGGGTAGCCGGCTGCGGAGCCGTTCACGCCG
TGGTACTGGTACTGGTAGGGGTTGAGCGCTTTGCCATAAGAAGCAGAGGT
AGGAGAGCAGTAGCCGTGCGGGGCGGCCCCCGCGGGACTGTAGTAATCAG
AATCGGTGGCCGAGGACTCGGGCAAAGTTGGCGATTCCTGAAACGCGTGG
TGCATGTGCGTGGATGTCGGGAACGGAACTTGGAAGTCGCCCGGATTTGA
TGCTTGGGAC

ACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATGGCT
GAGAAGCACCTGAAAAAATGTTCAGCGTGCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTACATCTCACACCAGTAAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGAAGA
ACACTCTTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATC
CTGCAATACCTCTTCTGGGCATATATCCAGAACATGCTCCAACTGCTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAAAAAT
GTGGTACATTTACACAATGGAGTACTACTCAGTTATTAAATAGAATGAAT
TTATGAAATTCCTAGGCAAATGGTTGGACCTGTAGGGCATCATCCTGAAT
GAGGTAACCCAATCACAAAAGAACTCAAATGATATGTACTCACTTATAAG
TAGATATTAGCTCAGAAACTTAGAATACCCAAGATATAAGATACAATTTG
TGAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTG
CCCCTTCTTAGAAT

Query= MSMg01no330_l05.b1 MSMg01no330_l05.b1 CHROMAT_FILE:
MSMg01no330_l05.b1 PHD_FILE: MSMg01no330_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:28 2005
         (565 letters)



>mm_chr6_6830948_6831912
          Length = 965

 Score = 1033 bits (534), Expect = 0.0
 Identities = 554/566 (97%), Gaps = 10/566 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaactaactttccttttattacgcaaacaccactagggctgcttgatttcaccc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaactaactttccttttattacgcaaacaccactagggctgcttgatttcaccc 264

                                                                       
Query: 65  accccccgccccccaaatcccttagcctctttgcagccaagctggctttctggctaggcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accccccgccccccaaatcccttagcctctttgcagccaagctggctttctggctaggcc 324

                                                                       
Query: 125 agctaggaatccagctaaggagggatcctcaagcagcgccagaggcaaaacacccgatta 184
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 agctaggaatccagctaaggagggatcctcgagcagcgccagaggcaaaacacccgatta 384

                                                                       
Query: 185 aacctcttcaaaagtcctccactgccccccccccaatgccggtgtgaggtgctgtcctgt 244
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 aacctcttcaaaagtcctccactgcccccccccccatgccggtgtgaggtgctgtcctgt 444

                                                                       
Query: 245 ttgcagtcccaggcccccactcgcttctgcgaagcacccttctatgggtgcggacagcgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgcagtcccaggcccccactcgcttctgcgaagcacccttctatgggtgcggacagcgt 504

                                                                       
Query: 305 ggccctcatctaccacccaacttggcgcccgcgccccc-----acggatgccctgggtac 359
           |||||||||||||||||||||||||||||||||          |||||||||||||||||
Sbjct: 505 ggccctcatctaccacccaacttggcgcccgcg-----gggttacggatgccctgggtac 559

                                                                       
Query: 360 ctgcctcccgcccccgcgcgcctacctggctggctggtggcactcgggacgcggttgtag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgcctcccgcccccgcgcgcctacctggctggctggtggcactcgggacgcggttgtag 619

                                                                       
Query: 420 gcgccgccgtactggtggtaggggctggcgtagccgtagtcggcataagccttggccggg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcgccgccgtactggtggtaggggctggcgtagccgtagtcggcataagccttggccggg 679

                                                                       
Query: 480 tagccggctgcggagccgttcacgccgtggtactggtactggtaggggttgagcgctttg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tagccggctgcggagccgttcacgccgtggtactggtactggtaggggttgagcgctttg 739

                                     
Query: 540 ccataagaagcagaggtaggagagca 565
           ||||||||||||||||||||||||||
Sbjct: 740 ccataagaagcagaggtaggagagca 765


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)