Query= MSMg01no331_c18.b1 MSMg01no331_c18.b1 CHROMAT_FILE:
MSMg01no331_c18.b1 PHD_FILE: MSMg01no331_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:02 2005
(158 letters)
>mm_chr6_15677071_15677628
Length = 558
Score = 298 bits (154), Expect = 1e-85
Identities = 157/158 (99%)
Strand = Plus / Minus
Query: 1 ataagtcttctatgcacataggtcatcctttacaaatgacaattcttacctcttgtaacc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ataagtcttctatgcacatagttcatcctttacaaatgacaattcttacctcttgtaacc 299
Query: 61 actaaatatcaggaaaatattcaatacttctggagagccattatactcctcttctttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 actaaatatcaggaaaatattcaatacttctggagagccattatactcctcttctttatg 239
Query: 121 tttgtttgttttggggttttgtttttgttttgttttgt 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tttgtttgttttggggttttgtttttgttttgttttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no331_c18.g1 MSMg01no331_c18.g1 CHROMAT_FILE:
MSMg01no331_c18.g1 PHD_FILE: MSMg01no331_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:02 2005
(605 letters)
>mm_chr6_15487548_15488552
Length = 1005
Score = 1058 bits (547), Expect = 0.0
Identities = 598/631 (94%), Gaps = 26/631 (4%)
Strand = Plus / Plus
Query: 1 attggatggagacagagaaaggatgatttttttaaggctttcctgtgctcattattattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attggatggagacagagaaaggatgatttttttaaggctttcctgtgctcattattattg 260
Query: 61 aatttcttctctcctcattatcctcatatagggcaacatatgtatacaggacatgtgcac 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatttcttctctcctaattatcctcatatagggcaacatatgtatacaggacatgtgcac 320
Query: 121 acagacataaacacacatacacacatatacatacatatatacatgtataaaatatataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagacataaacacacatacacacatatacatacatatatacatgtataaaatatataca 380
Query: 181 tatagggaatatgcacatatacatacatatacatacacatatatgcatactatatatata 240
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 381 tatagggaatatgcacatatacacatatatacatacacatatatgcatactatatatata 440
Query: 241 caaacatatatgtacatatgcgctatgcatac------atacatatatatatatatat-- 292
||||||||||||||||||||| |||| |||| ||||||||||||||||||||
Sbjct: 441 caaacatatatgtacatatgcactatatatacatatatatacatatatatatatatatat 500
Query: 293 ------------------atacatacacacatgtagggcatacacacatacacatatgca 334
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 atatatatatatacatacatacatacacacatatagggcatacacacatacacatatgca 560
Query: 335 tgcatatatacatgtatacagtatatgtatatatgtatacacacatttatatgcatgcat 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcatatatacatgtatacagtatatgtatatatgtatacacacatttatatgcatgcat 620
Query: 395 atgtgtatgcgtgtatatacatacacacacacacacacagcagagagatttggagactgg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtgtatgcgtgtatatacatacacacacacacacacagcagagagatttggagactgg 680
Query: 455 tatcctattcactactttttttattcttgtgactaaatgccaaccaagaagcaagatgag 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatcctattcactactttttttattcttgtgactaaatgccaaccaagaagcaagatgag 740
Query: 515 ggagcaagaagttatttcagcttacagttgaatagacatatcgatgatggcagtgaagca 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggagcaagaagttatttcagcttacagttgaatagacatatcgatgatggcagtgaagca 800
Query: 575 gatagtcccatcccttccatggtcagaaagc 605
|||||||||||||||||||||||||||||||
Sbjct: 801 gatagtcccatcccttccatggtcagaaagc 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
