Query= MSMg01no334_i20.b1 MSMg01no334_i20.b1 CHROMAT_FILE:
MSMg01no334_i20.b1 PHD_FILE: MSMg01no334_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:01 2005
(651 letters)
>mm_chr6_101446652_101447703
Length = 1052
Score = 1208 bits (625), Expect = 0.0
Identities = 643/651 (98%), Gaps = 5/651 (0%)
Strand = Plus / Plus
Query: 4 gaattcttatctgattac---taaaagatacccatgagcatttcttccctgggcattgtt 60
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttatctga--aaaagtaaaagatacccatgagcatttcttccctgggcattgtt 261
Query: 61 gtgaagtttggggggaaaactgactatgctgcataaaaggtcacaggaaaaggaattcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtgaagtttggggggaaaactgactatgctgcataaaaggtcacaggaaaaggaattcaa 321
Query: 121 aaggaaagagtgtcatgaataaaacaaacaaagaaaaacaaaatatctaaacaaaccaga 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 322 aaggaaagagtgtcatgaataaaacaaacaaagaaaaacaaaatatcgaaacaaaccaga 381
Query: 181 tagattagatagggctttccacaaagcaggttggtaatgaagttccacaggaacaagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tagattagatagggctttccacaaagcaggttggtaatgaagttccacaggaacaagcat 441
Query: 241 ttattgagcttctactgtttgttggatactttaccagccttgtccatcagtagaatatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttattgagcttctactgtttgttggatactttaccagccttgtccatcagtagaatatgt 501
Query: 301 cttccagtggcttggtatcactcttgttgctcaaagaagacaacctcactgatgtgtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cttccagtggcttggtatcactcttgttgctcaaagaagacaacctcactgatgtgtttg 561
Query: 361 tgggagatagaagctcatttcaagcacaaaaccctaaaggaggccttcaggtgagctgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgggagatagaagctcatttcaagcacaaaaccctaaaggaggccttcaggtgagctgca 621
Query: 421 gggcttggcaaagggaagtatgaggcaatgtttccatgagagacaaatggaaaagaaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gggcttggcaaagggaagtatgaggcaatgtttccatgagagacaaatggaaaagaaaga 681
Query: 481 ggctagaaaggaaacattcatgggctattggattgccaaggagaacatgactcactaagg 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 682 ggctagaaaggaaacattcatgggctgttggattgccaaggagaacatgactcactaagg 741
Query: 541 agagattggttatctgagtctctaagtcccttcttgaaaggagatatttttcttgcatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agagattggttatctgagtctctaagtcccttcttgaaaggagatatttttcttgcatgg 801
Query: 601 atcagactggagaagaagaaaatttgagggtatggctactctattctgaga 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 atcagactggagaagaagaaaatttgagggtatggctactctattctgaga 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_i20.g1 MSMg01no334_i20.g1 CHROMAT_FILE:
MSMg01no334_i20.g1 PHD_FILE: MSMg01no334_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:01 2005
(245 letters)
>mm_chr6_101618305_101618949
Length = 645
Score = 414 bits (214), Expect = e-120
Identities = 235/242 (97%), Gaps = 2/242 (0%)
Strand = Plus / Minus
Query: 2 aactagtgaggcaaatctttcacccattgatctatctcacgccctccaaactcacgtgca 61
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 343 aactagtgaggcaaatctttcacccattgatctatctcacgccatccaaactcacgtgca 284
Query: 62 cagttttaaagcctccctgtgactcttatagatctaaaggaccacattttattctttttg 121
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 283 cagttttaaagcctccctgtaactcttgtagatctaaaggaccacattttattctgtttg 224
Query: 122 tcttctatcagcttctcagaaaagatagatagatagatagatagatagatagatagatag 181
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 223 tcttctatcagcttctcagaaaatatagatagatagatagatagatagatagatagatag 164
Query: 182 atagatagatagatagatagatagatagatagatagat-gatagatagatagatagatag 240
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 163 atagatagatagatagat-gatagatagatagatagatagatagatagatagatagatag 105
Query: 241 at 242
||
Sbjct: 104 at 103
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 134
Number of extensions: 40
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
