TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTATTTATATTCTCTCTAAACATCATGAGCCCTCTCAAGTGTCTGTTTTC
AGCAAAACATCACATGTCCACTCACAAGACAACTTCCAGAAAAAACATCT
CTGACACAACTGAGTTTTTAAAGAAACCAGAAACTTCTCCTTCACATGGA
CAGCAGAAGTAAAAGAGCTTTTTGGACAGGGTCCTATCTGGCCTTCATCC
TCCACCAGGAGGCAGAGCTGAGACCCAGGCTTCTGGGCACCTTCCCAGCC
AGAGGAGAGTCAGCCTTTAGGGAGGGCTCTGACCCCTGGACTCAGGAGGT
AGATCTGAGATCCAGACTTCTGTGTACCTCTCCTGTAAGACAAGAGATTG
ACTACAGAGAGTTTCCAGAACACTGGGACTCAGGAGAGAGTTGGTCTCCT
AAGAGTGCTGACAGAGGCTAAAGAATCACAGGAGGAACAAGATCCAACCA
GAGACAGCTAGACCATCTAACACCAGAGATTACCAGATGGCAAAAGGCAA
ACATAAGAAGCTTACAAACAGAAACCAAGACCACTCAGCATCATCAGAAC
CCAGTACATCAACCACAGTGAGTCCTGGACACCCTAACACACCCAAAAAG
CAAGATTCGGATTTAAAATCATATCTCATGATGCTGGTAGAGGATTTTAG
GGAGGGCATTAATTACTCATTN

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGAGGGAGTGAAGAAAATTACAGT
GTAAGGTCCCAAGATTATAGGTTGATGGATACAAAGATCTCTTGGGCACT
AGCAGCAACCTGTAATTTTTGTGAAGTGGAAAAGGTTATGTTGCTTTCAG
AAAGCTAAGGCATGTTTCTTTGCTCTAAAAGACCTTGAATGAGGATCCCT
AAACGGAGACATGGCACTAGGAATTTGTTCAAGATTGTCTTTATTTCACA
AAGTGTCCAAAAGGTAAAAGTCAGTGAGAATAGGTGAATCCCAATTACAT
CGTATCCTTCTTTTTATGTTGAGTAAAATTTTCCTATCTAGACACCTCTG
TGGTTCAGACTGAAGTCTTTGTGTGTCTATTTGATGGAGATGGAAGGGTA
GACTAGAGTGAGGCAGAGAGAGACATGAGTAAAGGGACCTAGAAGAAAGA
TATCACATGGAATGTAGAATGTCCTCAGTAAGAATATGCTAAAAAAAAAA
AGAACTATTCAGTAGCTCTGAGAACATGAGAAGAATTTCAAAGTATAGTT
TTGATCATGATAGCTCACCTGTATCATGCATGTATGGTCAGGAATCACCA
ACTCCTAGTTACATAAACATACTGAAGATGATATAGACCATTCACATGTA
GGTTACCACCTGTGAGATATN

Query= MSMg01no336_f02.g1 MSMg01no336_f02.g1 CHROMAT_FILE:
MSMg01no336_f02.g1 PHD_FILE: MSMg01no336_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:21 2005
         (613 letters)



>mm_chr6_104666093_104667108
          Length = 1016

 Score = 1129 bits (584), Expect = 0.0
 Identities = 607/616 (98%), Gaps = 3/616 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgagggagtgaagaaaattacagtgtaaggtcccaagattataggttgatggatacaa 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgagcgagtgaagaaaattacagtgtaaggtcccaagattataggttgatggatacaa 260

                                                                       
Query: 61  agatctcttgggcactagcagcaacctgtaatttttgtgaagtggaaaaggttatgttgc 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatctctcgggcactagcagcaacctgtaatttttgtgaagtggaaaaggttatgttgc 320

                                                                       
Query: 121 tttcagaaagctaaggcatgtttctttgctctaaaagaccttgaatgaggatccctaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcagaaagctaaggcatgtttctttgctctaaaagaccttgaatgaggatccctaaac 380

                                                                       
Query: 181 ggagacatggcactaggaatttgttcaagattgtctttatttcacaaagtgtccaaaagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagacatggcactaggaatttgttcaagattgtctttatttcacaaagtgtccaaaagg 440

                                                                       
Query: 241 taaaagtcagtgagaataggtgaatcccaattacatcgtatccttctttttatgttgagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaagtcagtgagaataggtgaatcccaattacatcgtatccttctttttatgttgagt 500

                                                                       
Query: 301 aaaattttcctatctagacacctctgtggttcagactgaagtctttgtgtgtctatttga 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 aaaattttcctatctagacacctctgtggttcagactgaagtctttgtgtgtttatttga 560

                                                                       
Query: 361 tggagatggaagggtagactagagtgaggcagagagagacatgagtaaagggacctagaa 420
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggagatggaagagtagactagagtgaggcagagagagacatgagtaaagggacctagaa 620

                                                                       
Query: 421 gaaagatatcacatggaatgtagaatgtcctcagtaagaatatgctaaaaaa---aaaaa 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||
Sbjct: 621 gaaagatatcacatggaatgtagaatgtcctcagtaagaatatgctaaaaaagaaaaaaa 680

                                                                       
Query: 478 gaactattcagtagctctgagaacatgagaagaatttcaaagtatagttttgatcatgat 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaactattcagtagctctgagaacatgagaagaatttcaaagtatagttttgatcatgat 740

                                                                       
Query: 538 agctcacctgtatcatgcatgtatggtcaggaatcaccaactcctagttacataaacata 597
           | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 741 aactcacctgtatcatgcatgtatggtcaggaatcaccaactcctagttacatgaacata 800

                           
Query: 598 ctgaagatgatataga 613
           ||||||||||||||||
Sbjct: 801 ctgaagatgatataga 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1016
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1006
Effective search space:   606618
Effective search space used:   606618
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)