Query= MSMg01no336_g16.b1 MSMg01no336_g16.b1 CHROMAT_FILE:
MSMg01no336_g16.b1 PHD_FILE: MSMg01no336_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:28 2005
(469 letters)
>mm_chr6_114207891_114208759
Length = 869
Score = 862 bits (446), Expect = 0.0
Identities = 461/466 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaggcattacgtttatactgatcccaggattctgcagacccctaccccctactt 63
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaggcaggaggtttatactgatcccaggattctgcagacccctaccccctactt 263
Query: 64 ctgttgctaagcaacagctgctcattgctgagggtaccagcagaatatgagctgagggag 123
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 ctgttgctaagcaacagctgctcattgctgagggtaccagcagaagatgagctgagggag 323
Query: 124 gctgcagcagctggcttgtcctttactaagaatctgtcccttaagtcagacagtgagaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctgcagcagctggcttgtcctttactaagaatctgtcccttaagtcagacagtgagaat 383
Query: 184 cagagtcccagtgagaagcagggacttgcccaagatcaccagagctgtgagtgaacacat 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagagtccctgtgagaagcagggacttgcccaagatcaccagagctgtgagtgaacacat 443
Query: 244 cctagctctgcagtgttagagtgacagactcctgggaaaacttgttctgacccttaattc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctagctctgcagtgttagagtgacagactcctgggaaaacttgttctgacccttaattc 503
Query: 304 ctaagcccagggagacattactacagtgacagtggagcagagcccacatggctgtgtggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctaagcccagggagacattactacagtgacagtggagcagagcccacatggctgtgtggt 563
Query: 364 tgcaggcaagccccttcacctctttgagcatggctccatgccagtaggaatggtttgatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgcaggcaagccccttcacctctttgagcatggctccatgccagtaggaatggtttgatg 623
Query: 424 tcagcatgctctccctgaagtaaagtgtgtgtgtgtgtgtgagtga 469
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcagcatgctctccctgaagtaaagtgtgtgtgtgtgtgtgagtga 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_g16.g1 MSMg01no336_g16.g1 CHROMAT_FILE:
MSMg01no336_g16.g1 PHD_FILE: MSMg01no336_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:28 2005
(435 letters)
>mm_chr6_114383081_114383914
Length = 834
Score = 743 bits (384), Expect = 0.0
Identities = 417/428 (97%), Gaps = 3/428 (0%)
Strand = Plus / Minus
Query: 1 ttcagataaggtggtttcttacagcccagagagccctgggggattcttcagtaccctgaa 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 626 ttcagataaggtggtttcttacagctcagagagccctgggggattcttcagtaccctgaa 567
Query: 61 ctgtgttgacataatacaacagttccagaaaggcaacctgcaggcacaaggtcagaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctgtgttgacataatacaacagttccagaaaggcaacctgcaggcacaaggtcagaacct 507
Query: 121 ctagaccccctggatggatgtgacccatcgccatggcagtcacttggttctgataagcca 180
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 506 ctaga-cccctggatggatgtgacccatcaccatggcagtcacttggttctgataagcca 448
Query: 181 gggcaggggggtgctaggctgctgtctttgccttgggtgggctggggtagaatttctagc 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gggcaggggggtgctaggttgctgtctttgccttgggtgggctggggtagaatttctagc 388
Query: 241 ctgttctagggtcggcaagtaagcagggtggctgggagaacgcatggtaggcaggcctat 300
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctgaac-agggtcggcaagtaagcagggtggctgggagaacgcatggtaggcaggcctat 329
Query: 301 ctgtggcctactttggttgtctaatttcctacaaagggctcttgatgctc-agtcatatg 359
||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 328 ctgtggcctgctttggttgtctaatttcctacatagggctcttgatgctcaagtcatatg 269
Query: 360 gaagggtgggtcttggatctgatctgcaagcagctcgggcaaatgagactctttccagaa 419
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 268 gaagggtgggtcttggatctgatcttcaagcagctcgggcaaatgagactctttccagaa 209
Query: 420 agaaaacc 427
||||||||
Sbjct: 208 agaaaacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 834
Length adjustment: 9
Effective length of query: 426
Effective length of database: 825
Effective search space: 351450
Effective search space used: 351450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
