MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-336O15
Chromosome	6 (Build37)
Map Location	119,207,175 - 119,207,410
singlet/doublet	singlet
Overlap gene	Cacna2d4
Upstream gene	Bms1, Zfp248, Zfp9, Ankrd26, Cacna1c, Dcp1b
Downstream gene	Lrtm2, Adipor2, Wnt5b, Fbxl14, Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Bms1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213895 MGI:2446132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp248 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72720 MGI:1919970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22750 MGI:99210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd26 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232339 MGI:1917887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacna1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12288 MGI:103013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dcp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319618 MGI:2442404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacna2d4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319734 MGI:2442632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrtm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211187 MGI:2141485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adipor2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68465 MGI:93830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnt5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22419 MGI:98959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxl14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101358 MGI:2141676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Erc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111173 MGI:2151013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Rad52 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19365 MGI:101949
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232341 MGI:2442092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG406236 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:406236 MGI:3644010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ninj2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29862 MGI:1352751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B4galnt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330406 MGI:3041155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bms1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930554 GeneID:213895 MGI:2446132
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BMS1 homolog, ribosome assembly protein (yeast) transcript_id : NM_194339.1

name	Zfp248 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037306 GeneID:72720 MGI:1919970
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 248 transcript_id : NM_028335.1

name	Zfp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123700905 GeneID:22750 MGI:99210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 9 transcript_id : NM_011763.2

name	Ankrd26 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487432 GeneID:232339 MGI:1917887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 26 transcript_id : NM_001081112.1

name	Cacna1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930698 GeneID:12288 MGI:103013
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, L type, alpha 1C subunit transcript_id : NM_009781.2

name	Dcp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802049 GeneID:319618 MGI:2442404
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DCP1 decapping enzyme homolog b (S. cerevisiae) transcript_id : NM_001033379.2

name	Cacna2d4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517717 GeneID:319734 MGI:2442632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, alpha 2/delta subunit 4 transcript_id : NM_001033382.2

name	Lrtm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254213 GeneID:211187 MGI:2141485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeats and transmembrane domains 2 transcript_id : NM_172492.2

name	Adipor2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130777 GeneID:68465 MGI:93830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adiponectin receptor 2 transcript_id : NM_197985.3

name	Wnt5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560626 GeneID:22419 MGI:98959
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wingless-related MMTV integration site 5B transcript_id : NM_009525.2

name	Fbxl14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356028 GeneID:101358 MGI:2141676
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and leucine-rich repeat protein 14 transcript_id : NM_133940.2

name	Erc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120300970 GeneID:111173 MGI:2151013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELKS/RAB6-interacting/CAST family member 1 transcript_id : NM_053204.2

name	Erc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120300941 GeneID:111173 MGI:2151013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELKS/RAB6-interacting/CAST family member 1 transcript_id : NM_178085.3

name	Rad52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755279 GeneID:19365 MGI:101949
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD52 homolog (S. cerevisiae) transcript_id : NM_011236.1

name	Wnk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38424076 GeneID:232341 MGI:2442092
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WNK lysine deficient protein kinase 1 transcript_id : NM_198703.1

name	EG406236 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:81158088 GeneID:406236 MGI:3644010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG406236 transcript_id : NM_001037155.1

name	Ninj2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407046 GeneID:29862 MGI:1352751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ninjurin 2 transcript_id : NM_016718.2

name	B4galnt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38566699 GeneID:330406 MGI:3041155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-1,4-N-acetyl-galactosaminyl transferase 3 transcript_id : NM_198884.1

name	Bms1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930555 CCDS:CCDS20471.1 GeneID:213895 MGI:2446132
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : ribosome biogenesis protein BMS1 homolog product : BMS1-like, ribosome assembly protein protein_id : NP_919320.1

name	Zfp248 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037307 GeneID:72720 MGI:1919970
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : zinc finger protein 248 protein_id : NP_082611.1

name	Zfp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27261814 GeneID:22750 MGI:99210
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : zinc finger protein 9 protein_id : NP_035893.1

name	Ankrd26 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487433 GeneID:232339 MGI:1917887
definition	codon_start : 1 product : ankyrin repeat domain 26 protein_id : NP_001074581.1

name	Cacna1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930699 GeneID:12288 MGI:103013
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0030315 - T-tubule [Evidence TAS]; GO:0005891 - voltage-gated calcium channel complex [Evidence TAS] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0015270 - dihydropyridine-sensitive calcium channel activity [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005245 - voltage-gated calcium channel activity [Evidence IMP]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA]; GO:0008542 - visual learning [Evidence IMP] codon_start : 1 exception : mismatches in translation note : L-type Cav1.2; neuronal voltage-gated calcium channel alpha 1C subunit; skeletal muscle-specific calcium channel product : calcium channel, voltage-dependent, L type, alpha 1C subunit protein_id : NP_033911.2

name	Dcp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370029 GeneID:319618 MGI:2442404
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : DCP1 decapping enzyme homolog b protein_id : NP_001028551.1

name	Cacna2d4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517718 GeneID:319734 MGI:2442632
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : calcium channel, voltage-dependent, alpha 2/delta subunit 4 protein_id : NP_001028554.2

name	Lrtm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369680 CCDS:CCDS20472.1 GeneID:211187 MGI:2141485
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine-rich repeats and transmembrane domains 2 protein_id : NP_766080.1

name	Adipor2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39841016 CCDS:CCDS20473.1 GeneID:68465 MGI:93830
definition	GO_component : GO:0016021 - integral to membrane [Evidence IDA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0042562 - hormone binding [Evidence ISS]; GO:0042802 - identical protein binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0004872 - receptor activity [Evidence IDA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0019395 - fatty acid oxidation [Evidence ISS] [Evidence IDA]; GO:0009755 - hormone-mediated signaling [Evidence ISS]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 note : progestin and adipoQ receptor family member II product : adiponectin receptor 2 protein_id : NP_932102.2

name	Wnt5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678599 CCDS:CCDS20474.1 GeneID:22419 MGI:98959
definition	GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005102 - receptor binding [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007267 - cell-cell signaling [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0007223 - frizzled-2 signaling pathway [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0007165 - signal transduction [Evidence TAS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : wingless-related MMTV integration site 5B protein_id : NP_033551.1

name	Fbxl14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527158 CCDS:CCDS20475.1 GeneID:101358 MGI:2141676
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : F-box and leucine-rich repeat protein 14 protein_id : NP_598701.1

name	Erc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120300971 GeneID:111173 MGI:2151013
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IDA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0042147 - retrograde transport, endosome to Golgi [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Rab6 interacting protein 2 product : Rab6-interacting protein 2 isoform 1 protein_id : NP_444434.2

name	Erc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017397 CCDS:CCDS20476.1 GeneID:111173 MGI:2151013
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IDA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0042147 - retrograde transport, endosome to Golgi [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; Rab6 interacting protein 2 product : Rab6-interacting protein 2 isoform 2 protein_id : NP_835186.1

name	Rad52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755280 CCDS:CCDS20477.1 GeneID:19365 MGI:101949
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0000724 - double-strand break repair via homologous recombination [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAD52 homolog protein_id : NP_035366.1

name	Wnk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38424077 CCDS:CCDS20478.1 GeneID:232341 MGI:2442092
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEP]; GO:0005625 - soluble fraction [Evidence IDA]; GO:0042598 - vesicular fraction [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IC] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004860 - protein kinase inhibitor activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IC]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence IC] [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IC]; GO:0050794 - regulation of cellular process [Evidence IDA] codon_start : 1 exception : mismatches in translation product : protein kinase, lysine deficient 1 protein_id : NP_941992.1

name	EG406236 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:81158089 CCDS:CCDS20479.1 GeneID:406236 MGI:3644010
definition	codon_start : 1 product : hereditary sensory neuropathy, type II protein_id : NP_001032232.1

name	Ninj2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710070 GeneID:29862 MGI:1352751
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0042246 - tissue regeneration [Evidence IEA] codon_start : 1 product : ninjurin 2 protein_id : NP_057927.1

name	B4galnt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38566700 CCDS:CCDS20480.1 GeneID:330406 MGI:3041155
definition	GO_function : GO:0008376 - acetylgalactosaminyltransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : beta 1,4-N-acetylgalactosaminyltransferase-transferase-III protein_id : NP_942585.1

name	LOC666887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666887
definition	number : 1 pseudo : _no_value

name	LOC666887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666887
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:130652
definition	standard_name : D6Mit109

name	(CDS detail)
type	STS
link
xref	UniSTS:162556
definition	standard_name : RH125810

name	(CDS detail)
type	STS
link
xref	UniSTS:210348
definition	standard_name : RH136358

name	(CDS detail)
type	STS
link
xref	UniSTS:179447
definition	standard_name : AU043373

name	(CDS detail)
type	STS
link
xref	UniSTS:161559
definition	standard_name : RH124737

name	(CDS detail)
type	STS
link
xref	UniSTS:208019
definition	standard_name : BB392550

name	(CDS detail)
type	STS
link
xref	UniSTS:235534
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:159564
definition	standard_name : AU016736

name	(CDS detail)
type	STS
link
xref	UniSTS:235535
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:163399
definition	standard_name : L01776

name	(CDS detail)
type	STS
link
xref	UniSTS:120437
definition	standard_name : D4MGH30

name	(CDS detail)
type	STS
link
xref	UniSTS:240308
definition	standard_name : D4Arb4

name	(CDS detail)
type	STS
link
xref	UniSTS:259196
definition	standard_name : Cacna1c

name	(CDS detail)
type	STS
link
xref	UniSTS:495979
definition	standard_name : Cacna1c

name	(CDS detail)
type	STS
link
xref	UniSTS:130802
definition	standard_name : D6Mit253

name	(CDS detail)
type	STS
link
xref	UniSTS:123129
definition	standard_name : 12.MMHAP70FLD3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:165484
definition	standard_name : AI841794

name	(CDS detail)
type	STS
link
xref	UniSTS:185682
definition	standard_name : AW554121

name	(CDS detail)
type	STS
link
xref	UniSTS:471067
definition	standard_name : Adipor2

name	(CDS detail)
type	STS
link
xref	UniSTS:179448
definition	standard_name : AW545702

name	(CDS detail)
type	STS
link
xref	UniSTS:179449
definition	standard_name : M89799

name	(CDS detail)
type	STS
link
xref	UniSTS:144782
definition	standard_name : Wnt5b

name	(CDS detail)
type	STS
link
xref	UniSTS:235536
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179450
definition	standard_name : AW322056

name	(CDS detail)
type	STS
link
xref	UniSTS:216761
definition	standard_name : RH133478

name	(CDS detail)
type	STS
link
xref	UniSTS:208022
definition	standard_name : AW121159

name	(CDS detail)
type	STS
link
xref	UniSTS:235538
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:270156
definition	standard_name : PMC109228P1

name	(CDS detail)
type	STS
link
xref	UniSTS:163400
definition	standard_name : Z32767

name	(CDS detail)
type	STS
link
xref	UniSTS:235542
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:272408
definition	standard_name : PMC283554P1

name	(CDS detail)
type	STS
link
xref	UniSTS:178258
definition	standard_name : G67049

name	(CDS detail)
type	STS
link
xref	UniSTS:49002
definition	standard_name : D20S837

name	(CDS detail)
type	STS
link
xref	UniSTS:208024
definition	standard_name : AU022660

clone name	MSMg01-434J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358I20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-414J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-336O15.T7 (MSMg01no336_o15.b1)	MSMg01-336O15.TJ (MSMg01no336_o15.g1)
ACC	AG451819	AG451820
length	754	705
length of high quality (start - end)	241 (41 - 281)	34 (68 - 101)
definition	CHROMAT_FILE: MSMg01no336_o15.b1 PHD_FILE: MSMg01no336_o15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:25:07 2005	CHROMAT_FILE: MSMg01no336_o15.g1 PHD_FILE: MSMg01no336_o15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:25:07 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC ATATCATTACGATAATCAGAAAGGTTTTTTTATCAGAATTTAGGAGGTCA GAATTCAATGGGCTGATTTATTAAAAATGTACATATATAGAAACATTACT GTCTCACAGTCACACATTAATTGATACTAAAAGGTAGAAAATGGAGGAGA AACTAGGGCTAATCTCTGATAAATAATAGGGCAGGGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTNTNNNTNNNNNNNNNNNNN NNNNNNNNNNNTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTTTTCCCCCCCCCCCCCTNTNCCTCTCCCTNCNCNCNNCTCTTCTC TTTTTCTCCCCCCCTCTTCTTCTTTTTCCTTCTTTCCCCNCCCTCTTCCT TTTCCCCCTTCCTTCTTTTTTCTTTTTCCTCCTTCCTCTCCTTTTTTTTC CTTTCTTCTCTTTCTTCCCCCTCTTTTTTTCCCCCCTTCCTTTTCTCTCC TCTTTTCCTTTTCTTCTCCTCTTTCTTTTTTTTCTTTCTCCCTTCCTTTC TTCTCTTTTCTCTTTCTTCCCCCTTCTTCTCCCTTTTTTTTCCTNNCCTC CCCCCCCCCCCCCCNCCTNTTTTTCTTTTTTCCCTCCCTCTTTCTTCTTT CCCCCCTCTTTCTTTTTCTCTTCTTCTTCTTTCNCCCCCCTCTCCCCTTC TTTN	GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXCACGTCCAAGTTGCTATCCTGATTATCCAAATG GGACCTGGATGGTAACTACCTNNAGATCTTTACCNNAGGAGTCAAGGGNA ANNNAAAAANNNNNNNNNNGNGGGGNNGGGGGGGAGNAANAAAAAANACC ANANAATGAATGGGCCCTTACCACGGNNNGGGGGGCTTTAAAGACCCCCC CTTGGGGGGGGNGCCCCCTTGTGNAAAATAAAAAAAAAAAGCCTCCGGGA AAAAAAGGGAAAACCCCCCGTTTCTCTAAAAAGGGGTTTAAAAGAAAAAG GGGGGGAAAAAAAAAAAAAAAAATTTCCNTNTCCCCCCTCCAAAGAGTTT CTCTCCCGGGGGGGGGCGCCCCCCCTCNANNAAAAAAGGGGGGTTTTTTT TTTGGGCCCCCTCCCGGGGGGGGGGGGGGGAGAACACCCCCCCGCGGGGG AAAAAAAATTATATGCTCGCCCGCGCGGCGGTGTTGCCCCCACAAGAGAG GGGGGGGGGAAAAAAAAAAAAAACCCCCCCCCCCTCTCTTTTTTGTGTGG GGGGCCCCCCCCCAAAAAAAAAAATAACCCCCAACACCGGGGGGGGGGCG GCCCCTTTTTCTTCACAACAAGAAAGGGTGTTTTTTTTTTTCTTTTCCAA AAAAG
quality values	Open. Hide. 15 15 24 24 43 41 37 37 30 25 14 19 9 9 9 16 15 37 39 44 28 20 20 20 20 19 23 9 9 9 12 11 11 12 12 13 13 19 15 18 19 24 41 34 36 36 33 31 33 33 33 30 21 23 10 9 9 9 9 9 9 9 17 21 30 30 30 30 30 31 48 48 47 50 50 50 53 59 53 53 53 53 47 47 43 43 47 47 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 47 59 47 27 25 3 0 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 13 19 14 14 14 19 18 12 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 14 16 19 21 12 10 10 12 8 8 8 10 10 11 3 0 3 0 3 9 10 13 11 9 7 7 3 0 3 0 3 0 3 0 0 3 9 12 12 15 15 10 10 8 13 11 8 8 8 8 8 8 8 10 9 9 8 8 8 8 9 8 8 7 6 8 8 9 9 9 12 14 19 9 9 9 9 9 10 12 17 3 0 3 15 8 7 7 7 8 10 16 15 9 9 9 10 9 9 9 9 9 9 10 10 8 8 7 9 10 8 10 8 8 8 8 8 10 9 9 9 7 7 7 8 8 11 11 11 8 8 10 15 15 16 21 21 13 12 19 15 8 8 7 7 8 8 8 10 13 8 8 10 8 8 8 8 8 7 7 7 8 10 10 10 10 10 16 13 9 9 8 15 11 10 8 9 9 8 8 6 6 8 7 7 8 8 8 9 8 8 8 6 6 6 8 8 8 6 6 8 10 8 8 8 8 8 8 9 9 8 8 9 14 10 11 9 9 10 15 16 20 24 21 15 12 16 20 11 10 10 12 11 9 9 9 10 13 13 19 13 8 8 8 6 6 8 8 10 9 8 10 10 8 8 12 8 8 8 14 6 7 8 13 10 10 8 8 8 8 15 15 16 8 8 8 8 9 9 13 19 16 11 11 12 18 3 0 0 3 8 8 8 10 20 12 14 14 15 8 8 8 8 8 10 13 3 0 3 7 3 0 3 7 7 9 9 14 15 15 9 8 8 8 8 8 6 6 6 6 7 9 8 15 6 6 8 8 8 7 8 10 8 9 9 8 8 8 6 6 6 7 10 12 11 11 10 15 17 8 8 8 8 8 8 10 9 10 8 10 10 9 8 8 8 3 0 3 13 17 30 28 18 18 20 18 13 10 8 6 6 6 6 6 8 3 0	Open. Hide. 6 6 6 8 21 17 19 11 13 12 9 9 22 23 21 39 32 32 37 32 32 39 34 27 15 7 7 7 8 7 8 9 10 10 10 16 16 24 22 22 32 32 26 13 11 12 26 22 33 21 23 11 12 11 12 12 12 23 23 37 30 19 19 24 28 28 35 33 36 36 36 35 37 33 33 33 37 59 59 57 57 57 57 57 53 53 36 36 36 33 33 33 33 33 33 33 32 19 12 12 12 12 24 44 19 12 12 12 12 12 12 12 12 19 39 39 41 39 27 27 3 0 0 3 14 15 37 37 39 39 39 27 19 3 0 0 3 8 15 32 10 10 7 7 7 15 13 3 0 3 3 0 0 0 3 7 7 7 3 0 0 0 0 0 0 0 0 0 0 3 0 3 8 8 3 0 0 3 14 14 11 8 7 6 6 3 0 3 3 0 3 13 8 8 8 3 0 3 8 7 3 0 3 0 3 6 6 6 8 8 8 10 10 10 11 11 11 11 10 10 9 6 6 6 6 3 0 0 0 3 17 12 11 10 10 10 10 10 10 12 12 11 9 9 9 9 9 9 23 16 11 11 10 10 13 16 11 13 13 13 3 0 3 11 13 9 9 8 8 8 10 11 3 0 3 7 8 6 6 6 15 19 18 12 11 11 10 9 15 8 8 6 6 6 6 6 6 8 8 15 19 19 16 10 13 10 10 8 8 8 8 8 10 10 11 12 10 10 8 8 6 6 6 6 6 6 6 6 11 13 15 10 8 8 8 8 8 8 10 9 6 6 6 6 6 15 13 8 8 8 8 15 18 24 22 22 22 16 19 15 8 8 8 19 19 32 24 24 17 21 17 16 8 8 8 8 8 3 0 3 0 3 6 6 6 10 13 11 6 6 6 6 6 8 8 8 8 10 11 10 10 9 9 9 8 9 9 10 10 12 19 11 8 8 6 7 7 6 8 8 10 10 9 9 9 9 3 0 3 0 0 3 7 7 7 8 8 8 8 8 9 14 13 13 14 12 10 13 11 10 10 10 11 11 11 11 14 15 7 7 6 6 6 7 14 25 15 15 10 10 10 13 13 16 10 11 6 6 6 6 9 9 12 11 11 11 11 13 15 26 9 8 9 8 8 8 13 8 10 11 11 9 10 6 6 8 8 9 6 6 6 7 7 7 6 6 6 6 11 8 8 8 8 8 8 8 8 9 10 10 11 9 8 8 8 8 10 9 16 12 9 8 8 10 8 9 8 9 9 9 12 15 22 22 23 16 9 9 9 10 10 16 30 32 37 21 22 15 12 11 11 11 10 15 15 18 34 27 27 25 24 19 15 11 10 9 8 8 8 8 8 8 8 8 8 6 6 6 8 8 10 16 23 12 12 15 16 11 11 11 9 9 9 9 9 11 16 21 22 18 22 24 19 20 15 12 6 6 8 19 21 8 6 6 6 6 6 6 21 24 25 25 20 22 25 21 18 9 9 9 12 15 10 10 8 8 8 10 6 6 6 6 8 6 8 8 8 8 8 8 8 11 9 9 8 8 10 8 9 9 9 9 10 11 12 18 23 37 23 21 11 11 11 13 8 8 8 8 8 8 8 12 12 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no336_o15.b1 MSMg01no336_o15.b1 CHROMAT_FILE:
MSMg01no336_o15.b1 PHD_FILE: MSMg01no336_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:07 2005
         (241 letters)



>mm_chr6_119207015_119207656
          Length = 642

 Score =  385 bits (199), Expect = e-111
 Identities = 227/237 (95%), Gaps = 3/237 (1%)
 Strand = Plus / Minus

                                                                       
Query: 7   attcatatcattacgataatcagaaagg--tttttttatcagaatttaggaggtcagaat 64
           |||||||||| || ||||||||| ||||  ||||||||||||||||||||||||||||||
Sbjct: 396 attcatatcaataagataatcag-aaggtttttttttatcagaatttaggaggtcagaat 338

                                                                       
Query: 65  tcaatgggctgatttattaaaaatgtacatatatagaaacattactgtctcacagtcaca 124
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 337 tcaatgggctgatttattaaaaatgtacatgtatagaaacattactgtctcacagtcaca 278

                                                                       
Query: 125 cattaattgatactaaaaggtagaaaatggaggagaaactagggctaatctctgataaat 184
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 277 cattaattgatactaaaaggtagaaaatggaggagaaactagggctaacctctgataaat 218

                                                                    
Query: 185 aatagggcagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 241
           ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 217 aatagcgcagggtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgagtgt 161


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space:   146856
Effective search space used:   146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information