XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ACAGTGTCCCCAAAACATGCTTTATAAACCTACATGCTTCTGGACTGGGA
GAAGATTAACAAGTTATTAGCAGAGACAAAAGGAGTTACTAGGAGGCTGA
GATAGCAAGGTACTTCTTGTAGTTTCATCTTATAAATTCCATAGTCCCTT
ATCCATTAGATCCATTGCAGAAATTTAATGAAAATTCATGAATAATTCTT
TTGTATTATTTCTCCCCATCTAAACTGAAGATCCTGAAAAACATATTTCT
TTTTTTTATTTAGCTCTTTTTTTTAATTAGGTATTTTCTTCATTTACATT
TCAAATGCTATCCCAAAAGTCCCCCATTCCTCCTCACTCCCCTACCCAGC
CACTCCCACTCTTTGGCACTGACGTTCCTCTGTACTGAGGTATATAAAGT
TTGTAAGAACAAGGGGCCTCTCTTCCTAATGATAGCCGACTAGGCCATCT
TCTGATACATATGCAGGTAGAGACATGAGCTCCAGGGGGTACTGGTTAGT
TCATATAGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGAG
TACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGGTCCATCCAATAGCTG
ACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAA
GAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTAGTG

TGCAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTAATAAAATCTAAGTGAGATTATTAAGG
TGTGCCCTCATTCACAAACACGAGGAAACAGGACAGACAAGAGGAGAACT
CTGTCAAGACTGATGGAGAAGGCTGCCATTCACAAGCTAAAGCATCTAGG
CATCAGAAAATACTAGCCTTGCAAACACTTTATGGATTGTTCAAACTCTC
AGTGTCCAGAACTGTGGGAAAATAAGTATGTATTGACATACTATAACTAT
ATCTCTATATCTCTATATCATCTCTATATCTCTATATCATCTCTATATCT
CTATATCATCTCTATATCTCTATATCTATCTCTATATCTCTATATCTATC
TCTATATCTCTATATCATCTCTATATCTCTATATCTCTATATCTCTATCT
ATCTCTATATCTCTATATCATCTCTATATCTCTATATCTATCTCTATATC
TCTATCTCTATTTCTCTCTATCTCTCTATTTCTCTATCTCAATCTCCTTA
TATCTCTATATCGATCTCTATAACTAGCTTATCGCCCAATCTCTCTATCC
CCATCTCCTTATTTTTTTATTACCTATCTTCTAAATCTATCTTTATCGCT
CCCTCCCTAACTTATCTTAATCGTCTGTACACTATCTCCTATATCCTCTA
GAATGCGTATCTTATATTCGCGGTTACTCTGGGCTGN

Query= MSMg01no338_d12.b1 MSMg01no338_d12.b1 CHROMAT_FILE:
MSMg01no338_d12.b1 PHD_FILE: MSMg01no338_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:48 2005
         (634 letters)



>mm_chr6_14388740_14389773
          Length = 1034

 Score = 1160 bits (600), Expect = 0.0
 Identities = 627/636 (98%), Gaps = 4/636 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccaaaacatgctttataaacctacatgcttctggactgggagaagattaacaagttatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccaaaacatgctttataaacctacatgcttctggactgggagaagattaacaagttatt 260

                                                                       
Query: 61  agcagagacaaaaggagttactaggaggctgagatagcaaggtacttcttgtagtttcat 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 agcagagacaaaaggagttactaggaggctgtgatagcaaggtacttcttgtagtttcat 320

                                                                       
Query: 121 cttataaattccatagtcccttatccattagatccattgcagaaatttaatgaaaattca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttataaattccatagtcccttatccattagatccattgcagaaatttaatgaaaattca 380

                                                                       
Query: 181 tgaataattcttttgtattatttctccccatctaaactgaagatcctgaaaaacatattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaataattcttttgtattatttctccccatctaaactgaagatcctgaaaaacatattt 440

                                                                       
Query: 241 ctttttttt-atttagctcttttttttaattaggtattttcttcatttacatttcaaatg 299
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttttttttatttagctcttatttttaattaggtattttcttcatttacatttcaaatg 500

                                                                       
Query: 300 ctatcccaaaag-tcccccattcctcctcactcccctacccagccactcccactctttgg 358
           |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctatcccaaa-gctcccccattcctcctcactcccctacccagccactcccactctttgg 559

                                                                       
Query: 359 cactgacgttcctctgtactgaggtatataaagtttgtaagaacaaggggcctctcttcc 418
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 560 cactgacgttcctctgtactgaggtatataaagtttgtaa-aacaaggggcctctcttcc 618

                                                                       
Query: 419 taatgatagccgactaggccatcttctgatacatatgcaggtagagacatgagctccagg 478
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 619 taatgatagccgactaggccatcttctgatacatatgcagctagagacatgagctccagg 678

                                                                       
Query: 479 gggtactggttagttcatatagttgttccacctatagggttgcagatccctttagctcct 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gggtactggttagttcatatagttgttccacctatagggttgcagatccctttagctcct 738

                                                                       
Query: 539 tgagtactttctctagctcctccattgggggccctgtggtccatccaatagctgactgtg 598
           || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 739 tgggtactttctctagctcctcaattgggggccctgtggtccatccaatagctgactgtg 798

                                               
Query: 599 agcatccacttctgtgtttgctaggccccggcatag 634
           ||||||||||||||||||||||||||||||||||||
Sbjct: 799 agcatccacttctgtgtttgctaggccccggcatag 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)