MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-346E19
Chromosome	6 (Build37)
Map Location	135,351,393 - 135,351,849
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Bcl2l14, Lrp6, Mansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b, 1190002F15Rik, Apold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1, Pbp2, LOC100043890, Emp1
Downstream gene	Grin2b, EG668137, LOC545887, E330021D16Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Bcl2l14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66813 MGI:1914063
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16974 MGI:1298218
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mansc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67729 MGI:1914979
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Loh12cr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67774 MGI:1915024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043884 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043884
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein pseudo : _no_value

name	Dusp16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70686 MGI:1917936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Crebl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232430 MGI:1889385
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14760 MGI:892973
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdkn1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12576 MGI:104565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190002F15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381822 MGI:1915081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 27 ESTs

name	Apold1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381823 MGI:2685921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 2 Proteins

name	Ddx47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67755 MGI:1915005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gprc5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232431 MGI:1891250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gprc5d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93746 MGI:1935037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043668 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Hebp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15199 MGI:1333880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	8430419L09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74525 MGI:1921775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gsg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14840 MGI:1194499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Pbp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76400 MGI:1923650
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043890 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 538 ESTs, 9 Proteins

name	Emp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13730 MGI:107941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grin2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14812 MGI:95821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668137 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668137 MGI:3644226
definition	note : predicted gene, EG668137 pseudo : _no_value

name	LOC545887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 143 ESTs, 58 Proteins pseudo : _no_value

name	E330021D16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243676 MGI:2141773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Bcl2l14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358300 GeneID:66813 MGI:1914063
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl2-like 14 (apoptosis facilitator) transcript_id : NM_025778.2

name	Lrp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678717 GeneID:16974 MGI:1298218
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein receptor-related protein 6 transcript_id : NM_008514.1

name	Mansc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348447 GeneID:67729 MGI:1914979
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MANSC domain containing 1 transcript_id : NM_026345.3

name	Loh12cr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754072 GeneID:67774 MGI:1915024
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : loss of heterozygosity, 12, chromosomal region 1 homolog (human) transcript_id : NM_026371.2

name	Dusp16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205413 GeneID:70686 MGI:1917936
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 16 transcript_id : NM_001048054.1

name	Dusp16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205411 GeneID:70686 MGI:1917936
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 16 transcript_id : NM_130447.2

name	Crebl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367492 GeneID:232430 MGI:1889385
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cAMP responsive element binding protein-like 2 transcript_id : NM_177687.3

name	Gpr19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680070 GeneID:14760 MGI:892973
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 19 transcript_id : NM_008157.1

name	Cdkn1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227221 GeneID:12576 MGI:104565
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase inhibitor 1B transcript_id : NM_009875.3

name	1190002F15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255451 GeneID:381822 MGI:1915081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 27 ESTs product : RIKEN cDNA 1190002F15 gene transcript_id : XM_001481164.1

name	Apold1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378168 GeneID:381823 MGI:2685921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 2 Proteins product : apolipoprotein L domain containing 1 transcript_id : XM_355823.3

name	Ddx47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383958 GeneID:67755 MGI:1915005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 transcript_id : NM_026360.2

name	Gprc5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803155 GeneID:232431 MGI:1891250
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor, family C, group 5, member A transcript_id : NM_181444.4

name	Gprc5d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716416 GeneID:93746 MGI:1935037
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor, family C, group 5, member D transcript_id : NM_053118.1

name	Hebp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001579 GeneID:15199 MGI:1333880
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heme binding protein 1 transcript_id : NM_013546.2

name	8430419L09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803243 GeneID:74525 MGI:1921775
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8430419L09 gene transcript_id : NM_028982.3

name	Gsg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123317842 GeneID:14840 MGI:1194499
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : germ cell-specific gene 1 transcript_id : NM_001080553.1

name	Gsg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123317848 GeneID:14840 MGI:1194499
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : germ cell-specific gene 1 transcript_id : NM_010352.2

name	Gsg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123317840 GeneID:14840 MGI:1194499
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : germ cell-specific gene 1 transcript_id : NM_001080552.1

name	Pbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:128485804 GeneID:76400 MGI:1923650
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylethanolamine binding protein 2 transcript_id : NM_029595.3

name	LOC100043890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255455 GeneID:100043890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 538 ESTs, 8 Proteins product : similar to tctex-1 protein, transcript variant 1 transcript_id : XM_001481167.1

name	LOC100043890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255453 GeneID:100043890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 64 ESTs, 1 Protein product : similar to tctex-1 protein, transcript variant 2 transcript_id : XM_001481168.1

name	Emp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892886 GeneID:13730 MGI:107941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial membrane protein 1 transcript_id : NM_010128.4

name	Grin2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117168298 GeneID:14812 MGI:95821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, NMDA2B (epsilon 2) transcript_id : NM_008171.3

name	Bcl2l14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38194232 CCDS:CCDS20636.1 GeneID:66813 MGI:1914063
definition	codon_start : 1 product : apoptosis regulator BCL-G protein_id : NP_080054.1

name	Lrp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678718 GeneID:16974 MGI:1298218
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005041 - low-density lipoprotein receptor activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP] [Evidence IGI]; GO:0042074 - cell migration involved in gastrulation [Evidence IGI]; GO:0007275 - development [Evidence IEA]; GO:0042733 - embryonic digit morphogenesis [Evidence IGI]; GO:0035115 - embryonic forelimb morphogenesis [Evidence IGI]; GO:0035116 - embryonic hindlimb morphogenesis [Evidence IGI]; GO:0006897 - endocytosis [Evidence IEA]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IGI]; GO:0030178 - negative regulation of Wnt receptor signaling pathway [Evidence IGI]; GO:0016055 - Wnt receptor signaling pathway [Evidence ISS] [Evidence IEA] codon_start : 1 exception : mismatches in translation note : low density lipoprotein-related protein 6; crooked product : low density lipoprotein receptor-related protein 6 protein_id : NP_032540.1

name	Mansc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385846 CCDS:CCDS20637.1 GeneID:67729 MGI:1914979
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : MANSC domain containing 1 protein_id : NP_080621.1

name	Loh12cr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754073 CCDS:CCDS20638.1 GeneID:67774 MGI:1915024
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : loss of heterozygosity, 12, chromosomal region 1 homolog protein_id : NP_080647.2

name	Dusp16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205414 GeneID:70686 MGI:1917936
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0017017 - MAP kinase phosphatase activity [Evidence IEA]; GO:0016791 - phosphoric monoester hydrolase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0000188 - inactivation of MAPK activity [Evidence IDA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 note : isoform B1 is encoded by transcript variant B1; map kinase phosphatase-M; MAP kinase phosphatase-7 product : dual specificity phosphatase 16 isoform B1 protein_id : NP_001041519.1

name	Dusp16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205412 GeneID:70686 MGI:1917936
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0017017 - MAP kinase phosphatase activity [Evidence IEA]; GO:0016791 - phosphoric monoester hydrolase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0000188 - inactivation of MAPK activity [Evidence IDA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 note : isoform A1 is encoded by transcript variant A1; map kinase phosphatase-M; MAP kinase phosphatase-7 product : dual specificity phosphatase 16 isoform A1 protein_id : NP_569714.2

name	Crebl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244124 CCDS:CCDS20640.1 GeneID:232430 MGI:1889385
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : cAMP responsive element binding protein-like 2 protein_id : NP_808355.1

name	Gpr19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680071 CCDS:CCDS20641.1 GeneID:14760 MGI:892973
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : G protein-coupled receptor 19 protein_id : NP_032183.1

name	Cdkn1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542372 CCDS:CCDS20642.1 GeneID:12576 MGI:104565
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004861 - cyclin-dependent protein kinase inhibitor activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004860 - protein kinase inhibitor activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0048839 - inner ear development [Evidence IMP]; GO:0051271 - negative regulation of cell motility [Evidence IDA]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045736 - negative regulation of cyclin-dependent protein kinase activity [Evidence IDA]; GO:0050680 - negative regulation of epithelial cell proliferation [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0031116 - positive regulation of microtubule polymerization [Evidence IGI]; GO:0007605 - sensory perception of sound [Evidence IMP] codon_start : 1 product : cyclin-dependent kinase inhibitor 1B (P27) protein_id : NP_034005.2

name	1190002F15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255452 GeneID:381822 MGI:1915081
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481214.1

name	Apold1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38085372 GeneID:381823 MGI:2685921
definition	codon_start : 1 product : similar to vascular early response gene protein protein_id : XP_355823.1

name	Ddx47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229058 CCDS:CCDS20643.1 GeneID:67755 MGI:1915005
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein_id : NP_080636.2

name	Gprc5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31126968 CCDS:CCDS20644.1 GeneID:232431 MGI:1891250
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008067 - metabotropic glutamate, GABA-B-like receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : retinoic acid induced 3 protein_id : NP_852109.1

name	Gprc5d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716417 GeneID:93746 MGI:1935037
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008067 - metabotropic glutamate, GABA-B-like receptor activity [Evidence ISS] [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005118 - sevenless binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] [Evidence ISS]; GO:0042633 - hair cycle [Evidence NAS]; GO:0031424 - keratinization [Evidence NAS]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 product : G protein-coupled receptor, family C, group 5, member D protein_id : NP_444348.1

name	Hebp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124001580 CCDS:CCDS20645.1 GeneID:15199 MGI:1333880
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0020037 - heme binding [Evidence IDA] GO_process : GO:0042168 - heme metabolism [Evidence IC] codon_start : 1 note : p22 HBP; heme-binding protein; heme-binding protein 1 product : heme binding protein 1 protein_id : NP_038574.2

name	8430419L09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560063 GeneID:74525 MGI:1921775
definition	codon_start : 1 product : hypothetical protein LOC74525 protein_id : NP_083258.2

name	Gsg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123317841 GeneID:14840 MGI:1194499
definition	codon_start : 1 note : isoform a is encoded by transcript variant 1 product : germ cell-specific gene 1 isoform a protein_id : NP_001074021.1

name	Gsg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123317843 GeneID:14840 MGI:1194499
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : germ cell-specific gene 1 isoform b protein_id : NP_001074022.1

name	Gsg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123317849 GeneID:14840 MGI:1194499
definition	codon_start : 1 note : isoform b is encoded by transcript variant 3 product : germ cell-specific gene 1 isoform b protein_id : NP_034482.2

name	Pbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:128485805 CCDS:CCDS20646.1 GeneID:76400 MGI:1923650
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 product : phosphatidylethanolamine binding protein-2 protein_id : NP_083871.3

name	LOC100043890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255454 GeneID:100043890
definition	codon_start : 1 product : similar to tctex-1 protein isoform 2 protein_id : XP_001481218.1

name	LOC100043890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255456 GeneID:100043890
definition	codon_start : 1 product : similar to tctex-1 protein isoform 1 protein_id : XP_001481217.1

name	Emp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753748 CCDS:CCDS20647.1 GeneID:13730 MGI:107941
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : epithelial membrane protein 1 protein_id : NP_034258.1

name	Grin2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117168299 CCDS:CCDS20648.1 GeneID:14812 MGI:95821
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IDA]; GO:0042734 - presynaptic membrane [Evidence IEP]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007611 - learning and/or memory [Evidence TAS]; GO:0048168 - regulation of neuronal synaptic plasticity [Evidence TAS]; GO:0007268 - synaptic transmission [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : GluRepsilon2; N-methyl D-aspartate receptor 2B product : glutamate receptor, ionotropic, NMDA2B (epsilon 2) precursor protein_id : NP_032197.3

name	LOC100043668 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043668
definition	number : 2 pseudo : _no_value

name	LOC100043668 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043668
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:159592
definition	standard_name : AI429211

name	(CDS detail)
type	STS
link
xref	UniSTS:235564
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165503
definition	standard_name : AW124643

name	(CDS detail)
type	STS
link
xref	UniSTS:179504
definition	standard_name : AW558566

name	(CDS detail)
type	STS
link
xref	UniSTS:163153
definition	standard_name : RH126445

name	(CDS detail)
type	STS
link
xref	UniSTS:159594
definition	standard_name : 39.MMHAP35FLE6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159593
definition	standard_name : AI046348

name	(CDS detail)
type	STS
link
xref	UniSTS:235820
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235565
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:143243
definition	standard_name : Gpr19

name	(CDS detail)
type	STS
link
xref	UniSTS:495943
definition	standard_name : Gpr19

name	(CDS detail)
type	STS
link
xref	UniSTS:220765
definition	standard_name : RH138678

name	(CDS detail)
type	STS
link
xref	UniSTS:468000
definition	standard_name : Cdkn1b

name	(CDS detail)
type	STS
link
xref	UniSTS:164681
definition	standard_name : Cdkn1b

name	(CDS detail)
type	STS
link
xref	UniSTS:270519
definition	standard_name : PMC126040P1

name	(CDS detail)
type	STS
link
xref	UniSTS:273586
definition	standard_name : PMC87223P1

name	(CDS detail)
type	STS
link
xref	UniSTS:273587
definition	standard_name : PMC87223P2

name	(CDS detail)
type	STS
link
xref	UniSTS:273588
definition	standard_name : PMC87223P3

name	(CDS detail)
type	STS
link
xref	UniSTS:272582
definition	standard_name : PMC307617P3

name	(CDS detail)
type	STS
link
xref	UniSTS:273082
definition	standard_name : PMC317217P1

name	(CDS detail)
type	STS
link
xref	UniSTS:161524
definition	standard_name : RH124702

name	(CDS detail)
type	STS
link
xref	UniSTS:270954
definition	standard_name : PMC140666P1

name	(CDS detail)
type	STS
link
xref	UniSTS:164346
definition	standard_name : AI843786

name	(CDS detail)
type	STS
link
xref	UniSTS:161191
definition	standard_name : RH124369

name	(CDS detail)
type	STS
link
xref	UniSTS:248711
definition	standard_name : BF414255

name	(CDS detail)
type	STS
link
xref	UniSTS:179505
definition	standard_name : AI120476

name	(CDS detail)
type	STS
link
xref	UniSTS:151482
definition	standard_name : D12S1235E

name	(CDS detail)
type	STS
link
xref	UniSTS:235566
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162851
definition	standard_name : RH126139

name	(CDS detail)
type	STS
link
xref	UniSTS:248750
definition	standard_name : BF414790

name	(CDS detail)
type	STS
link
xref	UniSTS:113807
definition	standard_name : D4Got142

name	(CDS detail)
type	STS
link
xref	UniSTS:163401
definition	standard_name : D87325

name	(CDS detail)
type	STS
link
xref	UniSTS:165494
definition	standard_name : AI326308

name	(CDS detail)
type	STS
link
xref	UniSTS:489250
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130740
definition	standard_name : D6Mit197

name	(CDS detail)
type	STS
link
xref	UniSTS:465385
definition	standard_name : Emp1

name	(CDS detail)
type	STS
link
xref	UniSTS:163402
definition	standard_name : U25633

name	(CDS detail)
type	STS
link
xref	UniSTS:159578
definition	standard_name : U25633

name	(CDS detail)
type	STS
link
xref	UniSTS:159580
definition	standard_name : MHAa82b3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:131551
definition	standard_name : D8Mit338

name	(CDS detail)
type	STS
link
xref	UniSTS:35375
definition	standard_name : RH65679

name	(CDS detail)
type	STS
link
xref	UniSTS:179480
definition	standard_name : AW490526

name	(CDS detail)
type	STS
link
xref	UniSTS:143262
definition	standard_name : Grin2b

name	(CDS detail)
type	STS
link
xref	UniSTS:130852
definition	standard_name : D6Mit301

name	(CDS detail)
type	STS
link
xref	UniSTS:119997
definition	standard_name : RH94750

name	(CDS detail)
type	STS
link
xref	UniSTS:130807
definition	standard_name : D6Mit258

name	(CDS detail)
type	STS
link
xref	UniSTS:498328
definition	standard_name : Tubb3

name	(CDS detail)
type	STS
link
xref	UniSTS:208042
definition	standard_name : RH127208

name	LOC100043884 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255450 GeneID:100043884
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : hypothetical protein LOC100043884 pseudo : _no_value transcript_id : XR_035027.1

name	LOC545887 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255457 GeneID:545887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 143 ESTs, 58 Proteins product : similar to tubulin beta-3 pseudo : _no_value transcript_id : XR_035030.1

name	E330021D16Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255123 GeneID:243676 MGI:2141773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E330021D16 gene pseudo : _no_value transcript_id : XR_035141.1

clone name	MSMg01-192I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009N06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-346E19.T7 (MSMg01no346_e19.b1)	MSMg01-346E19.TJ (MSMg01no346_e19.g1)
ACC	AG458919	AG458920
length	751	756
length of high quality (start - end)	461 (32 - 492)	467 (65 - 531)
definition	CHROMAT_FILE: MSMg01no346_e19.b1 PHD_FILE: MSMg01no346_e19.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:36:57 2005	CHROMAT_FILE: MSMg01no346_e19.g1 PHD_FILE: MSMg01no346_e19.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:36:58 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CGGCGCTATACGACTCACTATTCCGAGAGGATCCGCGGAATTCTTGTTTG CCGTGCATCTGANAAATGAGAGGCCCACACAATGGTATTCAGACAGAAAC TTCGAACTTGGAACAACCCTGAAGAGTCTAGGAGTCACAATTACTCCAAA GTAGCGATATTACCTACTCCAGAATTTTGTGGTTATTATCCTTCTTAGGG TTTTGATTGGTTCAATGGTTGCTAAATCTCTTTCTGTATATTGAGAGGAC GAAGGGGGAAGAAGTTGGGATGTTAGCTTGTGTCCCTTGGAAATGCCAAT ATCAGAGGTTAGATGCAAAACCTTTATTATCACAATATGAGTGAACACAT TTAACAAATTTGTTCCTCCAACTGTTGTTGCCATTTTTCTTGGATTTTTC TGTCTCTTTGGTTTGTCTCTCAAAAGAGTAGCATCTTACAGGTGGCTGAG ATGAACAGTGGCGTTACCCTTAGTGAATTTTGAGACCCAGGAGCCAGTAA TTTCTAAAGAACACTGTAGGGACAGTTCAGCCTTTCCATACTTTATTTCT TCCCCCAAGGACCTCCTTATATCTCTGACGAAGACATATATGACAGACCT CCTATGCTCTTGGGTTGGCCGATTTAATGTTTGTACGACCTGGTTATACC AAAAGAATACTTCTAATTCCCTTTTTTGGTTCTGGAAATTTTCCACTAAC TTTCCTTCTCTTTGTCTGTATCACTTATCTCCTTACCTCTTTTTGCGGGT G	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXTCATCAGAACTGCTCTCCATATTCTGTGGTTGCCCTGTGT CATGGAGATCCTACAGCTTTGGGTCTGCAGGACTGGCCCTTTCACATGCT CCAGTAGTTCATAGATGAAGTAGATGTTGGGTGGGCCAACTCAGAGCTCT GGATCTGGGTCTGGGTGGTAACTGAGTTGGTCAGCTTGCCAGCTCTTCCA CACCCATACCACCAGGGCAAGTTCTCTATCACTGACCAGGCTAGCCCATC CAGTGCCACAGCTGGCAAGGGGTGGAGACAGCTCTCCAGCTCTCACACCC TCTAGATGGCTCGCCTGTGCCCCTAGCCATCAGAGCCAGTGCTACTGCGC CACCCAGGTAAGTTGCAGGACCCACTCTCCCAAGTCCTGCAGCTGGTGAA GGGTGAGACCAGCTTCCCAACCCACCTCGTGACCCTCATGACCCAGGCAG CCAGTTCTCTTGAATGGGGCAGGTGGCTAGGAATGGAGGTTGGGGTGCAG GGGTATCTCTCTGAGCCCACACCTCCTCACCTCATAGCAGATATGTGCCC AGACCCAGCCATGCCCTCCAGGCTGGCTCATCTGTTCTCCTATCTCCATT GCCTACTCTATTGCCCACAGAGGTGGTTTTAGCCCTTCCTTGTTGCCCCC TCCTTTGTTGGTTGTGGACCATTTCCCCCCTTCCTTTTTTTTTTTTTCCC CCTCCG
quality values	Open. Hide. 8 8 8 8 19 10 10 10 17 19 33 33 37 22 14 10 9 10 8 10 6 6 6 6 6 13 17 28 20 20 18 18 18 23 32 59 59 23 17 18 28 23 25 37 37 37 23 23 12 11 10 10 9 9 11 21 30 39 39 21 21 3 0 3 12 12 19 23 23 43 33 23 17 8 8 8 19 19 30 28 28 28 33 39 48 48 48 47 42 42 42 37 37 36 36 34 42 34 36 36 36 36 36 48 47 47 47 41 41 37 50 33 30 33 32 25 26 37 37 37 37 37 37 37 47 50 50 53 50 59 59 59 57 53 50 37 37 40 40 40 40 50 53 53 42 42 36 36 43 48 59 68 68 57 50 50 50 50 50 54 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 68 68 68 68 57 57 57 57 57 57 57 54 57 57 57 57 57 54 48 48 48 48 48 57 57 57 54 54 57 59 59 59 59 59 59 59 59 59 59 59 59 59 48 48 48 44 43 43 43 43 43 47 48 48 47 39 34 22 19 8 8 6 6 8 10 16 21 26 26 36 39 39 47 59 59 59 59 57 57 57 57 57 44 44 35 35 35 42 42 57 59 59 59 54 54 54 57 46 46 43 43 43 43 43 46 59 54 57 54 54 54 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 59 59 59 57 57 54 48 57 48 54 54 59 59 59 59 57 48 44 57 57 57 57 59 59 59 59 59 43 43 39 43 50 59 57 57 57 44 42 35 35 42 48 59 68 68 68 57 57 44 43 42 42 42 42 47 39 39 35 35 35 39 39 59 59 44 36 25 25 36 36 43 43 39 44 32 37 28 23 23 32 37 37 43 40 40 33 25 18 25 18 23 24 28 20 25 29 31 36 36 33 31 25 25 33 37 43 41 41 59 39 30 30 30 26 27 18 14 14 18 20 20 11 11 11 16 15 14 16 28 24 30 39 27 20 19 20 18 15 17 15 10 10 10 10 10 10 10 10 11 11 11 11 12 22 11 11 11 10 9 11 10 13 8 11 11 16 8 8 6 6 12 13 13 10 11 11 21 28 27 23 23 21 22 16 13 12 6 7 6 6 6 8 13 9 9 11 18 16 23 14 14 14 15 18 21 12 14 10 10 10 10 10 10 16 14 14 12 14 10 15 11 12 11 11 11 10 11 11 8 8 8 8 10 11 10 12 12 11 12 11 14 25 27 24 11 10 10 9 9 13 12 13 15 13 9 9 12 16 16 12 14 12 10 8 8 10 8 10 10 9 8 8 8 8 9 9 9 9 10 12 15 10 9 8 8 8 8 9 10 8 8 8 8 8 8 13 18 11 11 9 14 13 12 14 14 15 14 13 12 13 10 10 10 12 12 12 13 25 21 13 10 10 9 9 8 8 8 8 9 9 18 13 8 8 6 6 8 8 10 8 10 11 11 10 9 8 8 10 8 7 6 6 8 6 7 8 15 8 10 10 8 8 8 8 8 8 8 8 10 12 27 12 11 11 8 8 8 8 8	Open. Hide. 10 10 16 16 27 30 37 37 30 28 32 32 32 41 37 23 21 15 7 6 6 6 7 8 16 10 12 12 21 21 32 31 31 25 21 13 13 17 27 22 37 37 26 23 18 10 10 13 13 23 27 34 41 41 21 17 18 25 23 24 25 21 21 19 22 23 25 26 32 37 37 37 37 42 34 26 19 11 11 26 26 53 53 57 57 57 53 53 53 50 50 50 59 59 59 59 59 68 51 50 50 50 50 50 68 68 68 68 68 68 68 50 50 47 47 47 50 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 51 68 68 68 57 57 57 57 57 68 57 57 68 68 68 68 68 68 68 68 59 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 43 43 43 43 35 35 39 43 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 52 57 57 57 59 59 68 68 68 68 68 68 59 59 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 54 54 54 59 59 68 68 57 57 57 57 57 57 59 59 59 59 59 48 48 48 57 57 68 68 68 68 68 68 68 68 68 57 57 43 43 39 42 40 42 48 48 48 57 57 57 57 57 57 57 48 48 48 48 59 59 47 41 41 41 41 37 37 41 41 41 41 40 40 40 41 32 32 32 48 48 59 59 59 59 41 41 41 37 35 39 39 39 41 41 41 47 59 43 37 29 32 37 37 32 27 25 30 30 28 28 28 23 23 23 18 19 24 19 19 30 24 18 20 20 19 17 17 17 17 19 23 22 12 14 15 14 14 12 18 17 24 17 22 22 23 23 14 14 14 14 24 15 15 11 13 14 23 25 19 32 25 28 22 19 28 20 18 18 11 11 11 15 15 12 12 12 12 21 22 18 14 14 14 12 12 9 8 6 7 6 8 6 8 8 9 12 16 16 16 15 10 10 9 10 14 11 8 8 10 12 13 14 16 19 19 21 12 12 9 9 9 10 12 11 8 8 7 6 7 6 10 10 10 8 8 11 8 8 7 9 10 11 10 10 10 9 11 11 10 10 10 10 10 14 18 16 14 9 8 8 8 8 9 8 10 10 9 9 9 8 8 10 10 8 8 6 8 8 6 6 8 8 12 19 18 17 17 12 8 8 8 8 8 8 8 8 7 7 7 7 8 9 10 10 10 12 10 10 10 8 8 15 8 8 8 8 8 8 17 19 25 24 18 18 20 16 24 19 19 14 14 19 12 8 8 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no346_e19.b1 MSMg01no346_e19.b1 CHROMAT_FILE:
MSMg01no346_e19.b1 PHD_FILE: MSMg01no346_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:57 2005
         (461 letters)



>mm_chr6_135351188_135352049
          Length = 862

 Score =  839 bits (434), Expect = 0.0
 Identities = 451/457 (98%), Gaps = 1/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattcttgtttgccgtgcatctganaaatgagaggcc-cacacaatggtattcagaca 64
           ||||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 206 ggaattcttgtttggggtgcatctgaaaaatgagaggccacacacaatggtattcagaca 265

                                                                       
Query: 65  gaaacttcgaacttggaacaaccctgaagagtctaggagtcacaattactccaaagtagc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaaacttcgaacttggaacaaccctgaagagtctaggagtcacaattactccaaagtagc 325

                                                                       
Query: 125 gatattacctactccagaattttgtggttattatccttcttagggttttgattggttcaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gatattacctactccagaattttgtggttattatccttcttagggttttgattggttcaa 385

                                                                       
Query: 185 tggttgctaaatctctttctgtatattgagaggacgaagggggaagaagttgggatgtta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tggttgctaaatctctttctgtatattgagaggacgaagggggaagaagttgggatgtta 445

                                                                       
Query: 245 gcttgtgtcccttggaaatgccaatatcagaggttagatgcaaaacctttattatcacaa 304
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 446 gcttgtgtcccttggaaatgccaatatcagaggcaagatgcaaaacctttattatcacaa 505

                                                                       
Query: 305 tatgagtgaacacatttaacaaatttgttcctccaactgttgttgccatttttcttggat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tatgagtgaacacatttaacaaatttgttcctccaactgttgttgccatttttcttggat 565

                                                                       
Query: 365 ttttctgtctctttggtttgtctctcaaaagagtagcatcttacaggtggctgagatgaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttttctgtctctttggtttgtctctcaaaagagtagcatcttacaggtggctgagatgaa 625

                                                
Query: 425 cagtggcgttacccttagtgaattttgagacccagga 461
           |||||||||||||||||||||||||||||||||||||
Sbjct: 626 cagtggcgttacccttagtgaattttgagacccagga 662


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 862
Length adjustment: 10
Effective length of query: 451
Effective length of database: 852
Effective search space:   384252
Effective search space used:   384252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information